RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 GPR173Q9NS66 373 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 SLC22A11Q9NSA0 550 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 RASD1Q9Y272 281 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 MYH3P11055 1940 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 TAF1P21675 1872 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 OR5H15A6NDH6 313 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 B8ZZF3 427 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 FGF4P08620 206 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 FAM53BQ14153 422 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 GPR176Q14439 515 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 VN1R1Q9GZP7 353 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 POLE4Q9NR33 117 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ZNF346Q9UL40 294 aaKnown RBP6.52□□□□□ -1.37
RAG1-201ENST00000299440 YES1P07947 543 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 CD82P27701 267 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 PRSS3P35030 304 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 HOXD12P35452 270 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 DSCR4P56555 118 aaPredicted RBP6.52□□□□□ -1.37
RAG1-201ENST00000299440 CD83Q01151 205 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 FOXF1Q12946 379 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ISXQ2M1V0 245 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 PCGF3Q3KNV8 242 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 TBPL2Q6SJ96 375 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 USP51Q70EK9 711 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.52□□□□□ -1.37
RAG1-201ENST00000299440 SGPP1Q9BX95 441 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 CLMPQ9H6B4 373 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 MGAT4CQ9UBM8 478 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 PRELID3BQ9Y3B1 194 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 LRRC42Q9Y546 428 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ITGB4P16144 1822 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 METTL15A6NJ78 407 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 SERPINA7P05543 415 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 AKR1C1Q04828 323 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 FAM76BQ5HYJ3 339 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 RNF220Q5VTB9 566 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 LCN10Q6JVE6 187 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 BAIAP2L2Q6UXY1 529 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 EGFL6Q8IUX8 553 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 LOXL4Q96JB6 756 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 GABRG3Q99928 467 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 NIPAL2Q9H841 368 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 SSC5DA1L4H1 1573 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 A0A0U1RQK1 487 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 AGAP5A6NIR3 686 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 NME4O00746 187 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 NDUFB3O43676 98 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 IGLV3-27P01718 113 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 CDK2P24941 298 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ACTBP60709 375 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ACTG1P63261 375 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ZNF169Q14929 603 aaPredicted RBP6.52□□□□□ -1.37
RAG1-201ENST00000299440 THSD4Q6ZMP0 1018 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 MEPCEQ7L2J0 689 aaKnown RBP6.52□□□□□ -1.37
RAG1-201ENST00000299440 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 OR8H3Q8N146 312 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 OR10G3Q8NGC4 313 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 BIRC8Q96P09 236 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 CCDC106Q9BWC9 280 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 ACKR4Q9NPB9 350 aa6.52□□□□□ -1.37
RAG1-201ENST00000299440 SDR39U1Q9NRG7 319 aaPredicted RBP6.52□□□□□ -1.37
RAG1-201ENST00000299440 FAM189A1O60320 539 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 TNFRSF1AP19438 455 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 ETV4P43268 484 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 VEGFCP49767 419 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ZNF136P52737 540 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 BCL2A1Q16548 175 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 PXKQ7Z7A4 578 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GPR119Q8TDV5 335 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 CPNE4Q96A23 557 aaPredicted RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 SORCS2Q96PQ0 1159 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 NUDT9Q9BW91 350 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 ERVMER34-1Q9H9K5 563 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SERTAD4Q9NUC0 356 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MED29Q9NX70 200 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 EHFQ9NZC4 300 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 NDUFAF4Q9P032 175 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ASH2LQ9UBL3 628 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 KIF25Q9UIL4 384 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CLDN24A6NM45 220 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 NKX2-8O15522 239 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 TAPBPO15533 448 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 PIP5K1CO60331 668 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 CISD3P0C7P0 127 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 S100A1P23297 94 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 RRAS2P62070 204 aaPredicted RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 GGTA1PQ4G0N0 100 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CORO6Q6QEF8 472 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SPAG16Q8N0X2 631 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CLDN22Q8N7P3 220 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 OR8J2Q8NGG1 315 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SSUH2Q9Y2M2 353 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms