RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TIGD4Q8IY51 512 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 OR2B2Q9GZK3 357 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 ZMIZ1Q9ULJ6 1067 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 SF3B6Q9Y3B4 125 aaKnown RBP20.45■□□□□ 0.86
PTX3-201ENST00000295927 KIAA1549Q9HCM3 1950 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 OR5H15A6NDH6 313 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 TVP23AA6NH52 213 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 AQP7P3A6NL99 342 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 J3QLW9 94 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 CDK2AP1O14519 115 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 SLC16A7O60669 478 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 ZNF19P17023 458 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 OR12D2P58182 307 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 BDH1Q02338 343 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 WIPI1Q5MNZ9 446 aaPredicted RBP20.45■□□□□ 0.86
PTX3-201ENST00000295927 FAM205BPQ63HN1 556 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 TMEM225Q6GV28 225 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 SLC16A9Q7RTY1 509 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 UEVLDQ8IX04 471 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 MDS2Q8NDY4 140 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 TMEM203Q969S6 136 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 KLHL15Q96M94 604 aa20.45■□□□□ 0.86
PTX3-201ENST00000295927 EXOSC4Q9NPD3 245 aaKnown RBP20.45■□□□□ 0.86
PTX3-201ENST00000295927 A0A0J9YW62 118 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 RAMP1O60894 148 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 GPANK1O95872 356 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 CELP19835 753 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 RPS25P62851 125 aaKnown RBP20.44■□□□□ 0.86
PTX3-201ENST00000295927 GDPGP1Q6ZNW5 385 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 USP43Q70EL4 1123 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 GPAT4Q86UL3 456 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 SYT14Q8NB59 555 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 KCNE4Q8WWG9 221 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 TRMT61AQ96FX7 289 aaKnown RBP20.44■□□□□ 0.86
PTX3-201ENST00000295927 OXGR1Q96P68 337 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 KCNK17Q96T54 332 aa20.44■□□□□ 0.86
PTX3-201ENST00000295927 IGLV1-36A0A0B4J1U3 117 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 GJE1A6NN92 205 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SEC14L5O43304 696 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SP1P08047 785 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 CTLA4P16410 223 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 RFC3P40938 356 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 BIDP55957 195 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 H3F3AP84243 136 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 MFAP5Q13361 173 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 TBC1D25Q3MII6 688 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SFXN2Q96NB2 322 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 EMC6Q9BV81 110 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 ZNF552Q9H707 407 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 TRIM36Q9NQ86 728 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SSR3Q9UNL2 185 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 E9PI62 339 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 TNFSF11O14788 317 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 MAGEB4O15481 346 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 GABRA5P31644 462 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 ACTA2P62736 377 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 ACTG2P63267 376 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 ETFDHQ16134 617 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 TP53I3Q53FA7 332 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SLC25A25Q6KCM7 469 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 VASH1Q7L8A9 365 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 KBTBD8Q8NFY9 601 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 TSPAN10Q9H1Z9 355 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 ZNF703Q9H7S9 590 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 POLHQ9Y253 713 aa20.43■□□□□ 0.86
PTX3-201ENST00000295927 SIRT4Q9Y6E7 314 aaPredicted RBP20.43■□□□□ 0.86
PTX3-201ENST00000295927 DCDC2BA2VCK2 349 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 TRAF3IP2O43734 574 aaPredicted RBP20.42■□□□□ 0.86
PTX3-201ENST00000295927 NME2P1O60361 137 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 NME2P22392 152 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 CCL11P51671 97 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 CLDN20P56880 219 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 TUBA1BP68363 451 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 CSNK2A1P68400 391 aaPredicted RBP20.42■□□□□ 0.86
PTX3-201ENST00000295927 HSF2Q03933 536 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 RSPO4Q2I0M5 234 aaPredicted RBP20.42■□□□□ 0.86
PTX3-201ENST00000295927 CDONQ4KMG0 1287 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 TUBA1AQ71U36 451 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 SNX33Q8WV41 574 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 DTNBP1Q96EV8 351 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 FOXN4Q96NZ1 517 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 TM9SF2Q99805 663 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 WDR76Q9H967 626 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 MARCH7Q9H992 704 aa20.42■□□□□ 0.86
PTX3-201ENST00000295927 KLF13Q9Y2Y9 288 aaPredicted RBP20.42■□□□□ 0.86
PTX3-201ENST00000295927 LOC102725191A0A1B0GVB3 256 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 ZNF670-ZNF695F2Z2N8 137 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 H0YC42 278 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 GFRA3O60609 400 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 EIF1BO60739 113 aaKnown RBP20.41■□□□□ 0.86
PTX3-201ENST00000295927 CRABP1P29762 137 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 SERPINB10P48595 397 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CENPAP49450 140 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CDC20Q12834 499 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 DGUOKQ16854 277 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 VASNQ6EMK4 673 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 GALNTL5Q7Z4T8 443 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 SYS1Q8N2H4 156 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 TBC1D15Q8TC07 691 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 HAS2Q92819 552 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms