RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SRSF5Q13243 272 aaKnown RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 B3GLCTQ6Y288 498 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CFAP77Q6ZQR2 320 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MUL1Q969V5 352 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 TMEM106AQ96A25 262 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 SMOC1Q9H4F8 434 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 CD300AQ9UGN4 299 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 TRAPPC2LQ9UL33 140 aa16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 COA3Q9Y2R0 106 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP3-201ENST00000295324 MCM3APO60318 1980 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 A0A1W2PNR3 127 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 NXPH2O95156 264 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 IL1AP01583 271 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 SMN1Q16637 294 aaKnown RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 HES3Q5TGS1 186 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 FCRL6Q6DN72 434 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 CCBE1Q6UXH8 406 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 GFRALQ6UXV0 394 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 KCNG3Q8TAE7 436 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 ZBTB8AQ96BR9 441 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 TMEM59Q9BXS4 323 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 SCN4AP35499 1836 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 TOX3O15405 576 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 FCMRO60667 390 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 CLDN15P56746 228 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 MCCD1P59942 119 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 DCXRQ7Z4W1 244 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 ABI3BPQ7Z7G0 1075 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 ANKRD53Q8N9V6 530 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 BRIX1Q8TDN6 353 aaKnown RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 CNRIP1Q96F85 164 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 EMC6Q9BV81 110 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 GABRPO00591 440 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 CRYAAP02489 173 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 SELEP16581 610 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 PRPH2P23942 346 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 PFN4Q8NHR9 129 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 GLYATL2Q8WU03 294 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 MED18Q9BUE0 208 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 FAIMQ9NVQ4 179 aa16.21■□□□□ 0.19
CDC42EP3-201ENST00000295324 ADH6P28332 368 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 MAP2K6P52564 334 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF628Q5EBL2 1059 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 SLC16A9Q7RTY1 509 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR1S1Q8NH92 325 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 GNG12Q9UBI6 72 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 B3GALT5Q9Y2C3 310 aa16.21■□□□□ 0.18
CDC42EP3-201ENST00000295324 LINC01387J3KSC0 135 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 DRD5P21918 477 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 GABRA5P31644 462 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 NCCRP1Q6ZVX7 275 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 NIPSNAP1Q9BPW8 284 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 NOX4Q9NPH5 578 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 STEAP1Q9UHE8 339 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 MED16Q9Y2X0 877 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 IGHV5-51A0A0C4DH38 117 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 A0A1W2PPH5 198 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 SOCS6O14544 535 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF195O14628 629 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 LYRM1O43325 122 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 SSX5O60225 188 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 DPM1O60762 260 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 POLR2IP36954 125 aaKnown RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 EMC4Q5J8M3 183 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 RBM45Q8IUH3 476 aaKnown RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 NAXDQ8IW45 347 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR1L3Q8NH93 324 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 HSD17B8Q92506 261 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 GHSRQ92847 366 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 TIMM10BQ9Y5J6 103 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 HRH3Q9Y5N1 445 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 POLR2AP24928 1970 aaKnown RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 BRWD3Q6RI45 1802 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 A0A0A6YYD5 115 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ACOD1A6NK06 481 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 CD300LBA8K4G0 201 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF701M0R085 212 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 EPHA1P21709 976 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 RPP30P78346 268 aaKnown RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 CLN3Q13286 438 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 TCTN1Q2MV58 587 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR2I1PQ8NGU4 316 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 POLE4Q9NR33 117 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 LANCL2Q9NS86 450 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 DIMT1Q9UNQ2 313 aaKnown RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 TIMM8BQ9Y5J9 83 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 P2RY10O00398 339 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ACOT8O14734 319 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 KIR2DL3P43628 341 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 PRTGQ2VWP7 1150 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZFAND1Q8TCF1 268 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 C7orf34Q96L11 122 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 PFDN5Q99471 154 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR52A1Q9UKL2 312 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 BCKDHBP21953 392 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 S100PP25815 95 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 LILRB2Q8N423 598 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 NRG4Q8WWG1 115 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 TSNAXQ99598 290 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms