RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 FPR3P25089 353 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CD34P28906 385 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 YPEL5P62699 121 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC36A2Q495M3 483 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF362Q5T0B9 420 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 THSD4Q6ZMP0 1018 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 C3orf49Q96BT1 292 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SGCZQ96LD1 299 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PTDSS2Q9BVG9 487 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PARP12Q9H0J9 701 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 MAB21L2Q9Y586 359 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CIB4A0PJX0 185 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SBK2P0C263 348 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF84P51523 738 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SSX1Q16384 188 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 RNASE10Q5GAN6 216 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 LAIR2Q6ISS4 152 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 NIPAL3Q6P499 406 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 VASH1Q7L8A9 365 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 UBE3DQ7Z6J8 389 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 YRDCQ86U90 279 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 COMTD1Q86VU5 262 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 LRRC28Q86X40 367 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 OR52B4Q8NGK2 314 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PIGCQ92535 297 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SUCNR1Q9BXA5 334 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 C12orf49Q9H741 205 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GPATCH2Q9NW75 528 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 WBP1LQ9NX94 342 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC17A4Q9Y2C5 497 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CDH23Q9H251 3354 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ABOP16442 354 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CPEP16870 476 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PCMT1P22061 227 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CXADRP78310 365 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 LIPNQ5VXI9 398 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF440Q8IYI8 595 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF565Q8N9K5 539 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 OR5L2Q8NGL0 311 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 OR8D4Q8NGM9 314 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PIGTQ969N2 578 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 KTI12Q96EK9 354 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 TXNDC15Q96J42 360 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLIRPQ9GZT3 109 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 PLEKHB1Q9UF11 243 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 MMP17Q9ULZ9 603 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CACNA1GO43497 2377 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF736B4DX44 427 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 OR7A10O76100 309 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 S100GP29377 79 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 FASLGP48023 281 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SNRPGP62308 76 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 HTRA4P83105 476 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 SORDQ00796 357 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 TNK1Q13470 666 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 LAIR1Q6GTX8 287 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 TDHQ8IZJ6 230 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GPA33Q99795 319 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 HOXD1Q9GZZ0 328 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 RANBP3Q9H6Z4 567 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 WASH6PQ9NQA3 447 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ASF1BQ9NVP2 202 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PLEKHJ1Q9NW61 149 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SUSD2Q9UGT4 822 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 XIRP2A4UGR9 3374 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 ANAPC1Q9H1A4 1944 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 NSG1A0A0A6YYJ2 146 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 TEX51A0A1B0GUA7 166 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 E9PI62 339 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 CHP2O43745 196 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 GREM1O60565 184 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 RLN2P04090 185 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 PI3P19957 117 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 HERV-K104P61576 105 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 RPS15P62841 145 aaKnown RBP4.37□□□□□ -1.71
UBR1-201ENST00000290650 GUCA2AQ02747 115 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 RPL18Q07020 188 aaKnown RBP4.37□□□□□ -1.71
UBR1-201ENST00000290650 EFR3AQ14156 821 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 TRIM61Q5EBN2 209 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 UBE2NLQ5JXB2 153 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 CNEP1R1Q8N9A8 125 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 OR56B4Q8NH76 319 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 CD300LFQ8TDQ1 290 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 HOXB13Q92826 284 aaPredicted RBP4.37□□□□□ -1.71
UBR1-201ENST00000290650 RADILQ96JH8 1075 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 ZNF285Q96NJ3 590 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 GABARAPL1Q9H0R8 117 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 CALHM2Q9HA72 323 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 FBXO8Q9NRD0 319 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 TAS2R4Q9NYW5 299 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 C19orf53Q9UNZ5 99 aaPredicted RBP4.37□□□□□ -1.71
UBR1-201ENST00000290650 FAM221AA4D161 298 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 GGT3PA6NGU5 568 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 C4orf47A7E2U8 309 aa4.37□□□□□ -1.71
UBR1-201ENST00000290650 BRINP1O60477 761 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms