RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 LMF1Q96S06 567 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 SLC19A3Q9BZV2 496 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 LAMP5Q9UJQ1 280 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 ERVK-19Q9WJR5 959 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 HIF3AQ9Y2N7 669 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 USP34Q70CQ2 3546 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 TDRD6O60522 2096 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 OIP5O43482 229 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 PRAMEF2O60811 474 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 AKR7A3O95154 331 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 GPANK1O95872 356 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 CSRP1P21291 193 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 SDHAP31040 664 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 TNFRSF4P43489 277 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 BTG2P78543 158 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 TFF2Q03403 129 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 DCAF12L2Q5VW00 463 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 OR51D1Q8NGF3 324 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 OR6N2Q8NGY6 317 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 STEAP1Q9UHE8 339 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
SLC28A1-201ENST00000286749 TRBV5-7A0A0A0MS05 114 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GGT3PA6NGU5 568 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 TRIM77I1YAP6 450 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 ZNF254O75437 659 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 KLF8O95600 359 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 CSF1P09603 554 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 ST6GAL1P15907 406 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 MAT1AQ00266 395 aaKnown RBP12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 OR2AK2Q8NG84 335 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 SCARB1Q8WTV0 552 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GABRG3Q99928 467 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 COMMD4Q9H0A8 199 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 WDR76Q9H967 626 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 CACNA1IQ9P0X4 2223 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 HMSDA8MTL9 139 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 F5H5P2 479 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 LGALS8O00214 317 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 BET1O15155 118 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 CTAG2O75638 210 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 FBXO45P0C2W1 286 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GTF2F2P13984 249 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GABRA1P14867 456 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 PPP3CBP16298 524 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GRM7Q14831 915 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 CD226Q15762 336 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 MESTQ5EB52 335 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 OTPQ5XKR4 325 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 LRRC69Q6ZNQ3 347 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 BIVMQ86UB2 503 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 PRSS35Q8N3Z0 413 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 LHFPL5Q8TAF8 219 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 ASB12Q8WXK4 309 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 DGAT2Q96PD7 388 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 TTYH1Q9H313 450 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 TCEAL2Q9H3H9 227 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 IGFLR1Q9H665 355 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 MMP25Q9NPA2 562 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 TMEM138Q9NPI0 162 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 GRHPRQ9UBQ7 328 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 PFDN2Q9UHV9 154 aa12.02□□□□□ -0.49
SLC28A1-201ENST00000286749 KNL1Q8NG31 2342 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 TRAV18A0A075B6X5 111 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 KDM4BO94953 1096 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 CA3P07451 260 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 CELA2BP08218 269 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 RNH1P13489 461 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 MAOAP21397 527 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 GPR3P46089 330 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 DMWDQ09019 674 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 MELKQ14680 651 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 B3GNTL1Q67FW5 361 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 WBP2NLQ6ICG8 309 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 ANKRD16Q6P6B7 361 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 GSG1LQ6UXU4 331 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 ATG4DQ86TL0 474 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 GPR148Q8TDV2 347 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 SLC37A2Q8TED4 501 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 TNFAIP8L1Q8WVP5 186 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 TSPAN32Q96QS1 320 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 LPAR4Q99677 370 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 NKX3-1Q99801 234 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 C12orf4Q9NQ89 552 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 MED9Q9NWA0 146 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 CHURC1-FNTBB4DL54 471 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 TNFRSF10CO14798 259 aa12.01□□□□□ -0.49
SLC28A1-201ENST00000286749 SNAPC5O75971 98 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms