RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 LINC00346Q8IVM7 164 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 FBXW5Q969U6 566 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 RHNO1Q9BSD3 238 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MT-CO2P00403 227 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 ERVK-16P61578 105 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC36A2Q495M3 483 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 GLYATL3Q5SZD4 288 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 ACSM5Q6NUN0 579 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MOB3CQ70IA8 216 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM179BQ7Z7N9 219 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 YIPF5Q969M3 257 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 RASD2Q96D21 266 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 EVA1AQ9H8M9 152 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 PRAMEF27A3QJZ7 478 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 SELENOFO60613 162 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 FCGR2AP12318 317 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 ALKBH1Q13686 389 aaKnown RBP15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 PRAMEF9Q5VWM5 478 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 HIST2H3AQ71DI3 136 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 CDH26Q8IXH8 852 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MMP21Q8N119 569 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 OR56B1Q8NGI3 324 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 RLN3Q8WXF3 142 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 RSC1A1Q92681 617 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 FAM3DQ96BQ1 224 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 GIMAP5Q96F15 307 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 C1QTNF3Q9BXJ4 246 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MAN2B1O00754 1011 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 BET1O15155 118 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 SUSD5O60279 629 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF217O75362 1048 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 IGFBP6P24592 240 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 YOD1Q5VVQ6 348 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 TOE1Q96GM8 510 aaKnown RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MED18Q9BUE0 208 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 PURGQ9UJV8 347 aaKnown RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 LEUTXA8MZ59 168 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 P2RY10O00398 339 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MAGEB4O15481 346 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 LILRB3O75022 631 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MKXQ8IYA7 352 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 PFN4Q8NHR9 129 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 ULBP2Q9BZM5 246 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 POMT2Q9UKY4 750 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 FBXO7Q9Y3I1 522 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 ASCC3Q8N3C0 2202 aaKnown RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 H7C1Q1 480 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 TK1P04183 234 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 BLVRBP30043 206 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 ATP1B3P54709 279 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 HNF4GQ14541 408 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC48A1Q6P1K1 146 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 SAMD10Q9BYL1 202 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 PRSS16Q9NQE7 514 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 TAAR2Q9P1P5 351 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 ANKRD30BLA7E2S9 258 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 A8MXE2 369 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 GPR171O14626 319 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 RAB38P57729 211 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 CSNK1G2P78368 415 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MELKQ14680 651 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MFSD12Q6NUT3 480 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 BCL7CQ8WUZ0 217 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC25A21Q9BQT8 299 aaPredicted RBP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 NUP98P52948 1817 aa15.18■□□□□ 0.02
SH3RF1-201ENST00000284637 RGPD1P0DJD0 1748 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TRBV11-1A0A0K0K1C0 115 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 A0A1W2PPV4 95 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 GPR137BO60478 399 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 NSA2O95478 260 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 SBK3P0C264 359 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 EPHA2P29317 976 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 PGFP49763 221 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MTCP1P56278 107 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MRPS34P82930 218 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 OR51S1Q8NGJ8 323 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 GDE1Q9NZC3 331 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 STEAP1Q9UHE8 339 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MRPS28Q9Y2Q9 187 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 CHST2Q9Y4C5 530 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 HBQ1P09105 142 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 APLNRP35414 380 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM31Q5JXX7 168 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 OTUD1Q5VV17 481 aaPredicted RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ABHD17CQ6PCB6 329 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 RELL2Q8NC24 303 aaPredicted RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 NANOS1Q8WY41 292 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 HSD17B8Q92506 261 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ANKRD19PQ9H560 264 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 SPATA6Q9NWH7 488 aaPredicted RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 DNMT3BQ9UBC3 853 aaKnown RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MICAL3Q7RTP6 2002 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 A0A087WUU8 490 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 CPEP16870 476 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 RAB13P51153 203 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms