RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PRAMEF26H0Y7S4 382 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 GPR12P47775 334 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 C6orf132Q5T0Z8 1188 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 PODNL1Q6PEZ8 512 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OPN5Q6U736 354 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM130Q8N3G9 435 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 L3MBTL4Q8NA19 623 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR13C8Q8NGS7 320 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ACTL7AQ9Y615 435 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 NUP188Q5SRE5 1749 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 MROH1Q8NDA8 1641 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZCWPW2A0A1B0GU75 182 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TAAR5O14804 337 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 CASP3P42574 277 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TCEAL1Q15170 157 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TSEN54Q7Z6J9 526 aaKnown RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 RAB18Q9NP72 206 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SLC9B1P1A6NJY1 282 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SPI1P17947 270 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TPPP2P59282 170 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 RAB6CQ53S08 254 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TFAP2EQ6VUC0 442 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR13C2Q8NGS9 318 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 IL37Q9NZH6 218 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 CACNA1DQ01668 2161 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF541Q9H0D2 1346 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ABHD16AO95870 558 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR13C7P0DN81 318 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TRIM61Q5EBN2 209 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 H3F3CQ6NXT2 135 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 NAXDQ8IW45 347 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR2L13Q8N349 312 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 BARHL1Q9BZE3 327 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 STRAPQ9Y3F4 350 aaKnown RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR6C76A6NM76 312 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 NCR1O76036 304 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 G0S2P27469 103 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 UBE2IP63279 158 aaKnown RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF542PQ5EBM4 170 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ENTPD8Q5MY95 495 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 MFSD12Q6NUT3 480 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 S1PR3Q99500 378 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 POLEQ07864 2286 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 GLTPD2A6NH11 291 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 HEPACAM2A8MVW5 462 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 DEGS1O15121 323 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ADRB1P08588 477 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR2T7P0C7T2 308 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR1D4P47884 311 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TEKQ02763 1124 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SPCS2Q15005 226 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 DUSP6Q16828 381 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 PHLDA2Q53GA4 152 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SYT6Q5T7P8 510 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 LMNTD1Q8N9Z9 388 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 EMG1Q92979 244 aaKnown RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SLAMF7Q9NQ25 335 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ACSS1Q9NUB1 689 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 AJAP1Q9UKB5 411 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF816-ZNF321PA0A0X1KG74 233 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF593O00488 134 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 FRS3O43559 492 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SULT1C4O75897 302 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 GYPBP06028 91 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 CTXN2P0C2S0 81 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 CALCRP30988 508 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TPMTP51580 245 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 EXOSC7Q15024 291 aaKnown RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF761Q86XN6 746 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 OR4F15Q8NGB8 312 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM106AQ96A25 262 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 WDR76Q9H967 626 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 SPACA1Q9HBV2 294 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 NFS1Q9Y697 457 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF840PA6NDX5 716 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 DBX1A6NMT0 343 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 F10P00742 488 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 GNPNAT1Q96EK6 184 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-201ENST00000282516 VAPAQ9P0L0 249 aa8.1□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF264O43296 627 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ICMTO60725 284 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 NDUFB7P17568 137 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ADRA2CP18825 462 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 P2RY2P41231 377 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 NPY4RP50391 375 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 HBA1P69905 142 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 MFAP5Q13361 173 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SLC17A1Q14916 467 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 FAM26DQ5JW98 314 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ACOT4Q8N9L9 421 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OR52R1Q8NGF1 315 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms