RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 PIWIL3Q7Z3Z3 882 aaKnown RBP16.8■□□□□ 0.28
MSGN1-201ENST00000281047 WDFY1Q8IWB7 410 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 LRRC17Q8N6Y2 441 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 TMEM54Q969K7 222 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 SLC25A44Q96H78 314 aaPredicted RBP16.8■□□□□ 0.28
MSGN1-201ENST00000281047 PRSS27Q9BQR3 290 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 RAB1BQ9H0U4 201 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 NOX3Q9HBY0 568 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 ZNF446Q9NWS9 450 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 SPEF1Q9Y4P9 236 aa16.8■□□□□ 0.28
MSGN1-201ENST00000281047 ALPK2Q86TB3 2170 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 KIAA1324LA8MWY0 1029 aaPredicted RBP16.79■□□□□ 0.28
MSGN1-201ENST00000281047 BCL10O95999 233 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 MT-ND1P03886 318 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 PTDSS1P48651 473 aaKnown RBP16.79■□□□□ 0.28
MSGN1-201ENST00000281047 SNTB2Q13425 540 aaKnown RBP16.79■□□□□ 0.28
MSGN1-201ENST00000281047 LRRC23Q53EV4 343 aaPredicted RBP16.79■□□□□ 0.28
MSGN1-201ENST00000281047 HDDC2Q7Z4H3 204 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 SPATA21Q7Z572 469 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 ANKS4BQ8N8V4 417 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 OR2T12Q8NG77 320 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 MEPEQ9NQ76 525 aaPredicted RBP16.79■□□□□ 0.28
MSGN1-201ENST00000281047 RIMS3Q9UJD0 308 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 AP3M1Q9Y2T2 418 aa16.79■□□□□ 0.28
MSGN1-201ENST00000281047 LOC390937A0A1W2PQ73 354 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 A0A1W2PRG6 482 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 BLOC1S5-TXNDC5H3BN57 136 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 IGF2P01344 180 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 IGHG1P01857 330 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 THRBP10828 461 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 ZNF14P17017 642 aaPredicted RBP16.78■□□□□ 0.28
MSGN1-201ENST00000281047 TNFRSF1BP20333 461 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 NR4A1P22736 598 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 KDELR2P33947 212 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 RAB1AP62820 205 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 MELKQ14680 651 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 CARTPTQ16568 116 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 CYBRD1Q53TN4 286 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 C6orf52Q5T4I8 152 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 KRT80Q6KB66 452 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 ARPINQ7Z6K5 226 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 SVOPLQ8N434 492 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 TMEM239Q8WW34 195 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 SGTBQ96EQ0 304 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 DYNLRB1Q9NP97 96 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 CMAHPQ9Y471 501 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 ABCA1O95477 2261 aa16.78■□□□□ 0.28
MSGN1-201ENST00000281047 MCIDASD6RGH6 385 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 DHHO43323 396 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 OR7A10O76100 309 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 FARS2O95363 451 aaKnown RBP16.77■□□□□ 0.28
MSGN1-201ENST00000281047 OR8G3PP0DMU2 310 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 IFNA8P32881 189 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 LSP1P33241 339 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 OR1E2P47887 323 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 GIPRP48546 466 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 UGT2B15P54855 530 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 CLRN1P58418 232 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 PIN1Q13526 163 aaPredicted RBP16.77■□□□□ 0.28
MSGN1-201ENST00000281047 CYB5R2Q6BCY4 276 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 HIPK1Q86Z02 1210 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 NKAIN4Q8IVV8 208 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 MICU2Q8IYU8 434 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 SLC22A24Q8N4F4 322 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 ZNF540Q8NDQ6 660 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 TMEM255BQ8WV15 326 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 NEU4Q8WWR8 484 aaPredicted RBP16.77■□□□□ 0.28
MSGN1-201ENST00000281047 LZICQ8WZA0 190 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 RCN3Q96D15 328 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 MS4A3Q96HJ5 214 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 ZNF75AQ96N20 296 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 DOK1Q99704 481 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 MED4Q9NPJ6 270 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 ZNF224Q9NZL3 707 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 MED31Q9Y3C7 131 aa16.77■□□□□ 0.28
MSGN1-201ENST00000281047 ARFGEF3Q5TH69 2177 aa16.77■□□□□ 0.27
MSGN1-201ENST00000281047 SONP18583 2426 aaKnown RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 ELOVL7A1L3X0 281 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 VWC2LB2RUY7 222 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 SHOX2O60902 331 aaPredicted RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 PGA4P0DJD7 388 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 PGA3P0DJD8 388 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 ZNF35P13682 527 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 FUT1P19526 365 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 NR4A2P43354 598 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 DAP3P51398 398 aaKnown RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 RPS23P62266 143 aaKnown RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 LSM11P83369 360 aaKnown RBP eCLIP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 GALK2Q01415 458 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 RPL18Q07020 188 aaKnown RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 GGTLC2Q14390 218 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 CHRFAM7AQ494W8 412 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 GKAP1Q5VSY0 366 aaPredicted RBP16.76■□□□□ 0.27
MSGN1-201ENST00000281047 LRFN4Q6PJG9 635 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 DPPA2Q7Z7J5 298 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 SKA3Q8IX90 412 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 PFN4Q8NHR9 129 aa16.76■□□□□ 0.27
MSGN1-201ENST00000281047 RP9Q8TA86 221 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms