RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CLDN14O95500 239 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 IGFBP1P08833 259 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ACADSP16219 412 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 CRISP1P54107 249 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ERVK-25P63136 954 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 SLC36A3Q495N2 470 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 TSPO2Q5TGU0 170 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 BEND4Q6ZU67 534 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 OR2T33Q8NG76 320 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 Q96M85 177 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 OR10A4Q9H209 315 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 HEATR1Q9H583 2144 aaKnown RBP12.6□□□□□ -0.39
SSBP1-201ENST00000265304 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 VSX1Q9NZR4 365 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ADAM18Q9Y3Q7 739 aa12.6□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF726A6NNF4 738 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 ZAR1LA6NP61 321 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 EI24O14681 340 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 SLC43A1O75387 559 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 TRMUO75648 421 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 BMP5P22003 454 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 IGFBP5P24593 272 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 RPL4P36578 427 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 ASCL1P50553 236 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 BIDP55957 195 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 SIRPAP78324 504 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 RUNX1T1Q06455 604 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 C10orf128Q5T292 105 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 SLC27A4Q6P1M0 643 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 NIPAL3Q6P499 406 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF100Q8IYN0 542 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 OR4Q3Q8NH05 313 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 MAGEE2Q8TD90 523 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF566Q969W8 418 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 EME1Q96AY2 570 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 POLDIP3Q9BY77 421 aaKnown RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 GRHPRQ9UBQ7 328 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 IER3IP1Q9Y5U9 82 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 KLF2Q9Y5W3 355 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-201ENST00000265304 CENPEQ02224 2701 aa12.59□□□□□ -0.39
SSBP1-201ENST00000265304 SLC22A23A1A5C7 686 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 PRSS37A4D1T9 235 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 MITFO75030 526 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-201ENST00000265304 UPK3AO75631 287 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
SSBP1-201ENST00000265304 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 IGHG1P01857 330 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 ROS1P08922 2347 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 NR2C1P13056 603 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 EPHA2P29317 976 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 GRK5P34947 590 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 RAD23AP54725 363 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 NPRL3Q12980 569 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 PTGES3Q15185 160 aaKnown RBP12.58□□□□□ -0.4
SSBP1-201ENST00000265304 TRIP10Q15642 601 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 PGGHGQ32M88 737 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 NRN1LQ496H8 165 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 MESTQ5EB52 335 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 THEM4Q5T1C6 240 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 SLX4IPQ5VYV7 408 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 ACSM5Q6NUN0 579 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 CASP12Q6UXS9 341 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 LINGO2Q7L985 606 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 IGFN1Q86VF2 1251 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 NPEPL1Q8NDH3 523 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 SSC4DQ8WTU2 575 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 CA5BP1Q8WTZ4 195 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 HRASLS5Q96KN8 279 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 MUS81Q96NY9 551 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-201ENST00000265304 IFT27Q9BW83 186 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 HDHD5Q9BXW7 423 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 NMNAT2Q9BZQ4 307 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-201ENST00000265304 KCNJ16Q9NPI9 418 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 ASB6Q9NWX5 421 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 KIF17Q9P2E2 1029 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 IL20RAQ9UHF4 553 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 PRSS50Q9UI38 385 aa12.58□□□□□ -0.4
SSBP1-201ENST00000265304 PYCARD-AS1I3L0S3 204 aa12.57□□□□□ -0.4
SSBP1-201ENST00000265304 SLC16A6O15403 523 aa12.57□□□□□ -0.4
SSBP1-201ENST00000265304 SOX14O95416 240 aa12.57□□□□□ -0.4
SSBP1-201ENST00000265304 PPP1R3DO95685 299 aa12.57□□□□□ -0.4
SSBP1-201ENST00000265304 HMGN1P05114 100 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms