RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 GPA33Q99795 319 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 OR52D1Q9H346 318 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SLC25A19Q9HC21 320 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 TBC1D23Q9NUY8 699 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 IMPAD1Q9NX62 359 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 MRPL39Q9NYK5 338 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 JKAMPQ9P055 326 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SIGLEC7Q9Y286 467 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 B3GALT5Q9Y2C3 310 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 HIF3AQ9Y2N7 669 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 MED12LQ86YW9 2145 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF724A8MTY0 619 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 EEF1E1-BLOC1S5C9J1V9 151 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 C19orf84I3L1E1 186 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 M0R082 166 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 CDC42EP2O14613 210 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 EEF1E1O43324 174 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 YES1P07947 543 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 APEHP13798 732 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 GRNP28799 593 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 GGT2P36268 569 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SLC16A1P53985 500 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 RPS4XP62701 263 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 CSNK2BP67870 215 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 CDK5Q00535 292 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 TEKQ02763 1124 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 GINS1Q14691 196 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SLC17A1Q14916 467 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 EEF1A1P5Q5VTE0 462 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SLX4IPQ5VYV7 408 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 DPY19L2P2Q6ZN68 376 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 SLC46A3Q7Z3Q1 461 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 NUFIP2Q7Z417 695 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 NANOGNBQ7Z5D8 188 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 ADPRHL1Q8NDY3 354 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 OR5J2Q8NH18 312 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 OR51A7Q8NH64 312 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 Q96MT0 163 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 NR1H4Q96RI1 486 aaPredicted RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 TNFRSF13CQ96RJ3 184 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 TSSK6Q9BXA6 273 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 YTHDF1Q9BYJ9 559 aaKnown RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 OPN3Q9H1Y3 402 aaPredicted RBP10.26□□□□□ -0.77
PFDN1-201ENST00000261813 PIGMQ9H3S5 423 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 C12orf49Q9H741 205 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 EMC9Q9Y3B6 208 aa10.26□□□□□ -0.77
PFDN1-201ENST00000261813 CENPEQ02224 2701 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 A8MXE2 369 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 E9PQ18 207 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 IMPA2O14732 288 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 SMNDC1O75940 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 VAMP5O95183 116 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 SOX14O95416 240 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 IFNGP01579 166 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 TP53P04637 393 aaPredicted RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 CD8BP10966 210 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 EDNRAP25101 427 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 NTF4P34130 210 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 GRK5P34947 590 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 RPL4P36578 427 aaKnown RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 ASCL1P50553 236 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 ZP4Q12836 540 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 PMS2P3Q13401 168 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 TOP3AQ13472 1001 aaPredicted RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 TMEM201Q5SNT2 666 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF691Q5VV52 312 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 H1FNTQ75WM6 255 aaPredicted RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 LUZP2Q86TE4 346 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 KDM8Q8N371 416 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 LRRC17Q8N6Y2 441 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 OR8J1Q8NGP2 316 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 OR13C2Q8NGS9 318 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 PLEKHA8Q96JA3 519 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 CNBD2Q96M20 576 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 MUS81Q96NY9 551 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 GPX7Q96SL4 187 aaPredicted RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 IFT27Q9BW83 186 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 SF3B5Q9BWJ5 86 aaKnown RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 CHST11Q9NPF2 352 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 KCNJ16Q9NPI9 418 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 PLSCR4Q9NRQ2 329 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 B3GAT1Q9P2W7 334 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 PROCRQ9UNN8 238 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 RASD1Q9Y272 281 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 KLF2Q9Y5W3 355 aaPredicted RBP10.25□□□□□ -0.77
PFDN1-201ENST00000261813 FLVCR1Q9Y5Y0 555 aa10.25□□□□□ -0.77
PFDN1-201ENST00000261813 DIDO1Q9BTC0 2240 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MPDZO75970 2070 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 TRAV27A0A087WT01 109 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 LOC102725191A0A1B0GVB3 256 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 PRSS44E7EML9 344 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MS4A18H0YCH9 400 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MSTNO14793 375 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ARPC3O15145 178 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms