RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SOWAHCQ53LP3 525 aaPredicted RBP11.15□□□□□ -0.63
COL8A1-201ENST00000261037 ZFP82Q8N141 532 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 MED17Q9NVC6 651 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 CGGBP1Q9UFW8 167 aaPredicted RBP11.15□□□□□ -0.63
COL8A1-201ENST00000261037 LHX6Q9UPM6 363 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 RPS10-NUDT3A0A1W2PQS6 291 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 H0Y8G0 127 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 MGST1P10620 155 aaKnown RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 CASP3P42574 277 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 CHTF18Q8WVB6 975 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ZFPM2Q8WW38 1151 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 NEURL3Q96EH8 262 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 LANCL2Q9NS86 450 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OR52A1Q9UKL2 312 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 HTR1FP30939 366 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 UBE2KP61086 200 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 RIPPLY1Q0D2K3 151 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ABHD17CQ6PCB6 329 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TMEM207Q6UWW9 146 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SLC16A11Q8NCK7 471 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OR1J2Q8NGS2 313 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 IFI44Q8TCB0 444 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 BSCL2Q96G97 398 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 FER1L6-AS2Q96M78 137 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF578Q96N58 590 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ARPC5LQ9BPX5 153 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 DEFB127Q9H1M4 99 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TCEAL2Q9H3H9 227 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 MYOTQ9UBF9 498 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 GHRLQ9UBU3 117 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 A0A1B0GTW7 788 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 AQP7O14520 342 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TPOP07202 933 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 GPR85P60893 370 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PMPCAQ10713 525 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TRMT12Q53H54 448 aaKnown RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 MFSD12Q6NUT3 480 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PRSS45Q7RTY3 260 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ADGRF3Q8IZF5 1079 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 CELF2-AS1Q8N7Q2 184 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 CHST8Q9H2A9 424 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 POFUT1Q9H488 388 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 NIPAL2Q9H841 368 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 GLTPQ9NZD2 209 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ADAM23O75077 832 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SNAPINO95295 136 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TAS2R30P59541 319 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ACTBL2Q562R1 376 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 TMEM102Q8N9M5 508 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 LINC01599Q8WXQ3 324 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 GPR173Q9NS66 373 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SLX4Q8IY92 1834 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OR6C65A6NJZ3 312 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PLPP1O14494 284 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PRKNO60260 465 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PIGAP37287 484 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 NPY4RP50391 375 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PPT1P50897 306 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 HABP2Q14520 560 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 PRTGQ2VWP7 1150 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 GLYATL3Q5SZD4 288 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 C1orf140Q5VVS0 124 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 LRRC56Q8IYG6 542 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-201ENST00000261037 OR1E3Q8WZA6 343 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 BANF2Q9H503 90 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 MYH4Q9Y623 1939 aa11.14□□□□□ -0.63
COL8A1-201ENST00000261037 A0A1B0GX78 115 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 OIP5O43482 229 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 CD1CP29017 333 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF74Q16587 644 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 GLYR1Q49A26 553 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 GLIPR1L1Q6UWM5 242 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SLC46A3Q7Z3Q1 461 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 UBE2FQ969M7 185 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 KIR3DX1Q9H7L2 352 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 EMC7Q9NPA0 242 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 GSTP1P09211 210 aaKnown RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 APEX1P27695 318 aaKnown RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SNCAP37840 140 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms