RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADIGQ0VDE8 80 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ENDOGQ14249 297 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CD300LGQ6UXG3 332 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF550Q7Z398 422 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 C6orf120Q7Z4R8 191 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR8I2Q8N0Y5 310 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SPICQ8N5J4 248 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EID2Q8N6I1 236 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 DNASE2BQ8WZ79 361 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ZBED6CLQ96FA7 236 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 INPP5KQ9BT40 448 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNK12Q9HB15 430 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 GPATCH2LQ9NWQ4 482 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ARL15Q9NXU5 204 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 MFNGO00587 321 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNAB3O43448 404 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SUSD5O60279 629 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 C22orf31O95567 290 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 GSTM3P21266 225 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 FDXRP22570 491 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 TDGF1P3P51864 188 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ISL1P61371 349 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ST8SIA6P61647 398 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CLDN10P78369 228 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 LSM11P83369 360 aaKnown RBP eCLIP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 FSTL4Q6MZW2 842 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 DHRS13Q6UX07 377 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ARRDC1Q8N5I2 433 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 PLA2G15Q8NCC3 412 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 STARD4Q96DR4 205 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CMTM7Q96FZ5 175 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ADAT1Q9BUB4 502 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 TAF9BQ9HBM6 251 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ABRACLQ9P1F3 81 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 LAMP3Q9UQV4 416 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF264O43296 627 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 PMS2P2O95744 297 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 NPSP0C0P6 89 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ARAFP10398 606 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EPXP11678 715 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 FOLR2P14207 255 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 LSSP48449 732 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC11A1P49279 550 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 HS3ST5Q8IZT8 346 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 GLIS1Q8NBF1 620 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ARNTL2Q8WYA1 636 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 UPRTQ96BW1 309 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 HSH2DQ96JZ2 352 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 DPH2Q9BQC3 489 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 KXD1Q9BQD3 176 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SERTAD3Q9UJW9 196 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 AMY2AP04746 511 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CD37P11049 281 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 AQP1P29972 269 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 BSGP35613 385 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 UQCRFS1P47985 274 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CXADRP78310 365 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SFRP5Q5T4F7 317 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF584Q8IVC4 421 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR52B6Q8NGF0 335 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR5A2Q8NGI9 324 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR52P1PQ8NH57 321 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC35B2Q8TB61 432 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 AMDHD1Q96NU7 426 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EXOSC3Q9NQT5 275 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR5H14A6NHG9 310 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 GABRPO00591 440 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TK1P04183 234 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 FLT3LGP49771 235 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RCAN2Q14206 197 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF528Q3MIS6 628 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 C9orf57Q5W0N0 161 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 HBMQ6B0K9 141 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ENPP6Q6UWR7 440 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 VRK2Q86Y07 508 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 LINC00471Q8N535 108 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZFP41Q8N8Y5 198 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 JOSD2Q8TAC2 188 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PPCDCQ96CD2 204 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF607Q96SK3 696 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 RSPO3Q9BXY4 272 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 ZBP1Q9H171 429 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 OBP2BQ9NPH6 170 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 WRAP73Q9P2S5 460 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 USP3Q9Y6I4 520 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PDGFBP01127 241 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 PTHP01270 115 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 NDUFV2P19404 249 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 CSNK2A2P19784 350 aaPredicted RBP6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 TGFBR1P36897 503 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 LIMS1P48059 325 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 CRISP1P54107 249 aa6.23□□□□□ -1.41
PDGFRA-201ENST00000257290 NRLP54845 237 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms