RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SYT7O43581 403 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ST6GAL1P15907 406 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TAS2R20P59543 309 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 IFITM2Q01629 132 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM201Q5SNT2 666 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR4N2Q8NGD1 307 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 THRSPQ92748 146 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LIN7BQ9HAP6 207 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 C20orf141Q9NUB4 165 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF850A8MQ14 1090 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 H7C417 338 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ERVH48-1M5A8F1 160 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 DVL2O14641 736 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CISD3P0C7P0 127 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 GAAP10253 952 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CXCL3P19876 107 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 P2RX1P51575 399 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 FAM74A1Q5RGS3 127 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 RHOUQ7L0Q8 258 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CHAC2Q8WUX2 184 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR1F2PQ96R84 312 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 URM1Q9BTM9 101 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 NKX2-4Q9H2Z4 354 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 WDR76Q9H967 626 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PRDM7Q9NQW5 492 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 DAPP1Q9UN19 280 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM212A6NML5 194 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CTNSO60931 367 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SNAPC5O75971 98 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 GLCEO94923 617 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 HLA-AP01891 365 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 S100A11P31949 105 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SFTPDP35247 375 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CDK5Q00535 292 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF616Q08AN1 781 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 AANATQ16613 207 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 RASGRP3Q8IV61 690 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TEX19Q8NA77 164 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ACBD4Q8NC06 268 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TSLPQ969D9 159 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 NXF5Q9H1B4 397 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TSPAN10Q9H1Z9 355 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0A6YYD5 115 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 BORCS7-ASMTA0A0B4J1R7 106 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TXNL1O43396 289 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF595Q8IYB9 648 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 RNF215Q9Y6U7 377 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 EFCAB7A8K855 629 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PYCARD-AS1I3L0S3 204 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 HPXP02790 462 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 EMP2P54851 167 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 RPL18Q07020 188 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TIGD3Q6B0B8 471 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SLC51BQ86UW2 128 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM156Q8N614 296 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR52B4Q8NGK2 314 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR2G2Q8NGZ5 317 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SENP5Q96HI0 755 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ARHGAP9Q9BRR9 750 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SERGEFQ9UGK8 458 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TTC28Q96AY4 2481 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 DPM1O60762 260 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 THBS1P07996 1170 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 EPXP11678 715 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF16P17020 682 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MC2RQ01718 297 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TEX261Q6UWH6 196 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MARCH3Q86UD3 253 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 FOXRED1Q96CU9 486 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ASB16Q96NS5 453 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 HHIPQ96QV1 700 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 AIFM2Q9BRQ8 373 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 C1QTNF6Q9BXI9 259 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LYRM4Q9HD34 91 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 U3KQ87 197 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PRAMEF25A6NGN4 478 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 H3BML4 177 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SSX5O60225 188 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF254O75437 659 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TRAPPC6AO75865 159 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF250P15622 560 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 GNRHRP30968 328 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZP2Q05996 745 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF169Q14929 603 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 UNQ6126/PRO20091Q6UXV3 157 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR51T1Q8NGJ9 327 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 DIO2Q92813 273 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM106AQ96A25 262 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LRRC3BQ96PB8 259 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MAP3K3Q99759 626 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 UBQLN4Q9NRR5 601 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PRR14LQ5THK1 2151 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 C9J4A7 227 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SEMG1P04279 462 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 LUMP51884 338 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RAB38P57729 211 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SERTAD2Q14140 314 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RSU1Q15404 277 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms