RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PRELID3BQ9Y3B1 194 aa12.84□□□□□ -0.35
TARDBP-201ENST00000240185 SPP1P10451 314 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 ZNF93P35789 620 aaPredicted RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 PIGAP37287 484 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CRMP1Q14194 572 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 TMEM201Q5SNT2 666 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 OR6M1Q8NGM8 313 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 GPR174Q9BXC1 333 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 YTHDF2Q9Y5A9 579 aaKnown RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 DOK2O60496 412 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SMIM18P0DKX4 95 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SRMP19623 302 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 NKX2-1P43699 371 aaPredicted RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 TRA2BP62995 288 aaKnown RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 LCN15Q6UWW0 184 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CBARPQ8N350 705 aaPredicted RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 NKX2-4Q9H2Z4 354 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 RAB22AQ9UL26 194 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 MCTS1Q9ULC4 181 aaKnown RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 AKR7A2O43488 359 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 ITGB7P26010 798 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 HTR5AP47898 357 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SLC17A1Q14916 467 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 AANATQ16613 207 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 PLPP7Q8NBV4 271 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SEH1LQ96EE3 360 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 MUTYHQ9UIF7 546 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CIDEAO60543 219 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 GCAP28676 217 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 SOX4Q06945 474 aaPredicted RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CTSL3PQ5NE16 218 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 LRRC18Q8N456 261 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 RNF175Q8N4F7 328 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 CHST14Q8NCH0 376 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 OR1J2Q8NGS2 313 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 OR52N1Q8NH53 320 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 NMNAT3Q96T66 252 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 PIGQQ9BRB3 760 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 WDR76Q9H967 626 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 UBQLN4Q9NRR5 601 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
TARDBP-201ENST00000240185 MN1Q10571 1320 aaPredicted RBP12.83□□□□□ -0.36
TARDBP-201ENST00000240185 LOC102724200A0A096LPH7 203 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 ACOT8O14734 319 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 FABP1P07148 127 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 TCHHQ07283 1943 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 ABHD17BQ5VST6 288 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 NIPSNAP1Q9BPW8 284 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 MMP7P09237 267 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OR8U8P0C7N1 319 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 RUNX2Q13950 521 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 KDM4DQ6B0I6 523 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OVCH1Q7RTY7 1134 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OR4F5Q8NH21 305 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OR4F4Q96R69 305 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 SLC17A9Q9BYT1 436 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 ACSS1Q9NUB1 689 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 NECAP2Q9NVZ3 263 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 NXT1Q9UKK6 140 aaKnown RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 EMC9Q9Y3B6 208 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OR52A4PA6NMU1 304 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 P2RY10O00398 339 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 HIST1H1TP22492 207 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 CST6Q15828 149 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 C15orf39Q6ZRI6 1047 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 TCTE3Q8IZS6 198 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 SLC38A5Q8WUX1 472 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 SRRQ9GZT4 340 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 A0A0A6YYJ9 748 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 A0A1W2PPQ1 181 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 FITM1A5D6W6 292 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 TCAPO15273 167 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 GABRB1P18505 474 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 FGF7P21781 194 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 CD70P32970 193 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 C21orf62-AS1Q17RA5 79 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 YOD1Q5VVQ6 348 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 OR5M10Q6IEU7 315 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 STT3BQ8TCJ2 826 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 GNPNAT1Q96EK6 184 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 PCDHB10Q9UN67 800 aa12.82□□□□□ -0.36
TARDBP-201ENST00000240185 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
TARDBP-201ENST00000240185 CD37P11049 281 aa12.81□□□□□ -0.36
TARDBP-201ENST00000240185 GZMKP49863 264 aa12.81□□□□□ -0.36
TARDBP-201ENST00000240185 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
TARDBP-201ENST00000240185 ZNF620Q6ZNG0 422 aa12.81□□□□□ -0.36
TARDBP-201ENST00000240185 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
TARDBP-201ENST00000240185 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms