RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 YOD1Q5VVQ6 348 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 MOB3CQ70IA8 216 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF709Q8N972 641 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 HHIPL1Q96JK4 782 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 BOCQ9BWV1 1114 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 DEFB129Q9H1M3 183 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ELOVL2Q9NXB9 296 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 LSM2Q9Y333 95 aaKnown RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 CST4P01036 141 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 H2AFB1P0C5Y9 115 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 CORO1AP31146 461 aaKnown RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 FCGR2CP31995 323 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 TAS2R38P59533 333 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 RAB11AP62491 216 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 GAMTQ14353 236 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 INSL4Q14641 139 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 L3MBTL4Q8NA19 623 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 GDF15Q99988 308 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ADAM19Q9H013 955 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 PLRG1O43660 514 aaKnown RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 FOLR1P15328 257 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 ATF1P18846 271 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 CD82P27701 267 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 TACR3P29371 465 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 OPRD1P41143 372 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 SLC26A5P58743 744 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 HTD2P86397 168 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 IAH1Q2TAA2 248 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 MBOAT2Q6ZWT7 520 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 M1APQ8TC57 530 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
VAMP4-201ENST00000236192 SPIN2AQ99865 258 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 SPIN2BQ9BPZ2 258 aa11.88□□□□□ -0.51
VAMP4-201ENST00000236192 SCN4AP35499 1836 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 CLDN4O14493 209 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 NDUFB2O95178 105 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 TYRP1P17643 537 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 OR10J1P30954 320 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 YBX1P67809 324 aaKnown RBP11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SLC14A1Q13336 389 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 ACOT6Q3I5F7 207 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-201ENST00000236192 DMRTA1Q5VZB9 504 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SDR9C7Q8NEX9 313 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 CXorf40AQ8TE69 158 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 ADIPOR1Q96A54 375 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 HEXA-AS1Q9H8Q6 139 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 MYOTQ9UBF9 498 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 FOXJ3Q9UPW0 622 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 A0A087WV62 115 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 DCDC2BA2VCK2 349 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 C8orf89P0DMQ9 161 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 POU3F4P49335 361 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 RAB30Q15771 203 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 FAM27D1Q5T7N8 215 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SGPP1Q9BX95 441 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 TP53TG5Q9Y2B4 290 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 FRS3O43559 492 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
VAMP4-201ENST00000236192 CARD18P57730 90 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 TPPP2P59282 170 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 HAGHQ16775 308 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SYT9Q86SS6 491 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SRMSQ9H3Y6 488 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 MTHFD2LQ9H903 347 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-201ENST00000236192 CENPMQ9NSP4 180 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 H7BYZ3 331 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 LIMS3P0CW19 117 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 LIMS4P0CW20 117 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SLC25A4P12235 298 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 TM4SF1P30408 202 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SPOCK1Q08629 439 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 IER5LQ5T953 404 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 LEG1Q6P5S2 330 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 SULF2Q8IWU5 870 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF485Q8NCK3 441 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 OR51D1Q8NGF3 324 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 WNT2BQ93097 391 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms