RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 FRMPD3Q5JV73 1810 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 TRBV6-7A0A0A0MS04 114 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 DCTN6O00399 190 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SMAD9O15198 467 aaKnown RBP11.89□□□□□ -0.51
MSH2-201ENST00000233146 INSIG1O15503 277 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 GZMBP10144 247 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 HMGCS2P54868 508 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 UNQ9370/PRO34162Q6UXP9 181 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 TMED4Q7Z7H5 227 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 THNSL2Q86YJ6 484 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 CWH43Q9H720 699 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 CXorf36Q9H7Y0 433 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 MED20Q9H944 212 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SPACA1Q9HBV2 294 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 IL17BQ9UHF5 180 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SMCO3A2RU48 225 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 DVL1O14640 695 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 CALCBP10092 127 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 GTF2F2P13984 249 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 RAC2P15153 192 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 KCNE1P15382 129 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SOX8P57073 446 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 TRA2AQ13595 282 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSH2-201ENST00000233146 SLC9A5Q14940 896 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 UBE2V2Q15819 145 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SYPL1Q16563 259 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 RAB8BQ92930 207 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 MRGPRX3Q96LB0 322 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SLC12A9Q9BXP2 914 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 SAGE1Q9NXZ1 904 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 H0YIV9 168 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 ITGB1BP1O14713 200 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 EPPINO95925 133 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 PFN3P60673 137 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 UBE3DQ7Z6J8 389 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 TAF8Q7Z7C8 310 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 GKN2Q86XP6 184 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 EID2BQ96D98 161 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 NEURL3Q96EH8 262 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 PARP11Q9NR21 331 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 MARCH5Q9NX47 278 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 NOP16Q9Y3C1 178 aaKnown RBP11.89□□□□□ -0.51
MSH2-201ENST00000233146 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
MSH2-201ENST00000233146 IGSF6O95976 241 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 CTSLP07711 333 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 TMIGD3P0DMS9 266 aaPredicted RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 ITPKBP27987 946 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 APLNRP35414 380 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 PPM1AP35813 382 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 YBEYP58557 167 aaPredicted RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 CLEC2AQ6UVW9 174 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 MMP21Q8N119 569 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 PHYHIPQ92561 330 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 MUCL1Q96DR8 90 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 SMIM19Q96E16 107 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 GAL3ST4Q96RP7 486 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 HIST1H2BLQ99880 126 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 TMEM269A0A1B0GVZ9 245 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 PIN1P1O15428 100 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 CD3DP04234 171 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 F13BP05160 661 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 QDPRP09417 244 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 NKX6-1P78426 367 aaPredicted RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 ZNF280BQ86YH2 543 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 OR2L8Q8NGY9 312 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 RRNAD1Q96FB5 475 aaKnown RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 SLC17A9Q9BYT1 436 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 STARD10Q9Y365 291 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 GAPDHSO14556 408 aaPredicted RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 NTN1O95631 604 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 CSF2RAP15509 400 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 FNDC3BQ53EP0 1204 aaKnown RBP11.88□□□□□ -0.51
MSH2-201ENST00000233146 FBXL22Q6P050 247 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 ZBTB8AQ96BR9 441 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 SCRT1Q9BWW7 348 aa11.88□□□□□ -0.51
MSH2-201ENST00000233146 NOX4Q9NPH5 578 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms