RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 GPR55Q9Y2T6 319 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 PLSCR5A0PG75 271 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 D6RAR5 112 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 IMPA2O14732 288 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 SULT1B1O43704 296 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 GPX5O75715 221 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 HOXA9P31269 272 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 SLC30A7Q8NEW0 376 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ANKRD9Q96BM1 317 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 LCORQ96JN0 433 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 OR52A1Q9UKL2 312 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 HMGN4O00479 90 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 PTGER4P35408 488 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 SAXO2Q658L1 398 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 PCDHGA5Q9Y5G8 931 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 MCRIP1C9JLW8 97 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 RAB27BO00194 218 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 NDUFA6P56556 154 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 SLC35A2P78381 396 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 ADGRE4PQ86SQ3 457 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 NRSN2Q9GZP1 204 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 HSFX1Q9UBD0 423 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 NXT1Q9UKK6 140 aaKnown RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 TCRBV5S2A0A599 114 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 SYT5O00445 386 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 KITLGP21583 273 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 RNF4P78317 190 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 NKX3-1Q99801 234 aaPredicted RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 PURGQ9UJV8 347 aaKnown RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 GLCEO94923 617 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 DUSP5Q16690 384 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 TRMT12Q53H54 448 aaKnown RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 AVPI1Q5T686 147 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 LANCL3Q6ZV70 420 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 Q96M85 177 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 DDOQ99489 341 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 BANF2Q9H503 90 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 RAB9BQ9NP90 201 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 WSB2Q9NYS7 404 aaPredicted RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 HRO43593 1189 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 SLC2A1P11166 492 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 MRPL19P49406 292 aaKnown RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 TAS2R30P59541 319 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 MSMO1Q15800 293 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 ACSM5Q6NUN0 579 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 AAED1Q7RTV5 226 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 MDGA2Q7Z553 956 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 TMEM179BQ7Z7N9 219 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 PLPP5Q8NEB5 264 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 SLC7A6Q92536 515 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 CALHM2Q9HA72 323 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 MBNL1Q9NR56 388 aaKnown RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 QPCTLQ9NXS2 382 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 COA3Q9Y2R0 106 aaPredicted RBP12.32□□□□□ -0.44
NEK4-201ENST00000233027 WIF1Q9Y5W5 379 aa12.32□□□□□ -0.44
NEK4-201ENST00000233027 LGI1O95970 557 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 OR13C7P0DN81 318 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 MAGEB1P43366 347 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CAMK2BQ13554 666 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 TESK1Q15569 626 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 NLRP8Q86W28 1048 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 C1QTNF3Q9BXJ4 246 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 ASIC5Q9NY37 505 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 A0A0A6YYJ9 748 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 CLDN1O95832 211 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 GABREP78334 506 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 DGCR2P98153 550 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 FAAP20Q6NZ36 180 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 HSD17B11Q8NBQ5 300 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 OR13C5Q8NGS8 318 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 NOSIPQ9Y314 301 aaKnown RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CPEP16870 476 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 TNFSF4P23510 183 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CCR9P51686 369 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 MFAP5Q13361 173 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 IAH1Q2TAA2 248 aaPredicted RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 GLYR1Q49A26 553 aaPredicted RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 PAPD4Q6PIY7 484 aaKnown RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 OPN5Q6U736 354 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 SLC51BQ86UW2 128 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 FITM1A5D6W6 292 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms