RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 IL5P05113 134 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 OR4E1P0C645 316 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 CSF2RBP32927 897 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF239Q16600 458 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 RTP3Q9BQQ7 232 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 RAB22AQ9UL26 194 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 A0A1W2PQU0 124 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 INHBBP09529 407 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 RAG2P55895 527 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PRAMEF8Q5VWM4 474 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PRAMEF7Q5VXH5 474 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF511Q8NB15 262 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 GAR1Q9NY12 217 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 HMGN4O00479 90 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 LILRB5O75023 590 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SNRPEP62304 92 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 Q6ZRG5 221 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 TMEM156Q8N614 296 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 FAM71CQ8NEG0 241 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SHDQ96IW2 340 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SERTAD3Q9UJW9 196 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 H7C1C5 153 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SIGLEC6O43699 453 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 JTBO76095 146 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 LAP3P28838 519 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 DCTDP32321 178 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SSTP61278 116 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 LCN6P62502 163 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
HCFC2-201ENST00000229330 CDONQ4KMG0 1287 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 OR13C5Q8NGS8 318 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 NME2P1O60361 137 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 DHPSP49366 369 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 NPY4RP50391 375 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 RFLNAQ6ZTI6 216 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 KDM4EB2RXH2 506 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 YKT6O15498 198 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 GLCEO94923 617 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 FOLR1P15328 257 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CLINT1Q14677 625 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 LINC00303Q3SY05 128 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 C9orf62Q8N4C0 152 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 KCNG3Q8TAE7 436 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SGCZQ96LD1 299 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 STRCP1A6NGW2 1772 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SLC5A10A0PJK1 596 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR6C76A6NM76 312 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR5K4A6NMS3 321 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SLCO2B1O94956 709 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CFIP05156 583 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 TAS2R30P59541 319 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 RUNX3Q13761 415 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SLC25A35Q3KQZ1 300 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 KLHDC9Q8NEP7 349 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR52E1Q8NGJ3 308 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 OR5M8Q8NGP6 311 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 LINC00597Q9H2U6 94 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 BRINP1O60477 761 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CBX7O95931 251 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 POU3F3P20264 500 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 C12orf73Q69YU5 71 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 LYPD8Q6UX82 237 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SPTSSAQ969W0 71 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 ULBP3Q9BZM4 244 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
HCFC2-201ENST00000229330 CMC2Q9NRP2 79 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 PCDHGA5Q9Y5G8 931 aa12.72□□□□□ -0.37
HCFC2-201ENST00000229330 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 NPPBP16860 134 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF836Q6ZNA1 936 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
HCFC2-201ENST00000229330 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 CLSTN3Q9BQT9 956 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms