RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ANK2Q01484 3957 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 IGHV2OR16-5A0A0B4J2B6 119 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 IGHV4-61A0A0C4DH41 118 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 SLC35F4A4IF30 521 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 hCG_2039718K7EN88 272 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 PHF1O43189 567 aaPredicted RBP12.99□□□□□ -0.33
UPK3A-201ENST00000216211 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
UPK3A-201ENST00000216211 TPST2O60704 377 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 HPRP00739 348 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 BGLAPP02818 100 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 ANPEPP15144 967 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 IGFBP5P24593 272 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 AQP1P29972 269 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 GZMKP49863 264 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 PPOXP50336 477 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 RGS8P57771 180 aaPredicted RBP12.99□□□□□ -0.33
UPK3A-201ENST00000216211 OR1Q1Q15612 314 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 IL17RELQ6ZVW7 336 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 MDP1Q86V88 176 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 UEVLDQ8IX04 471 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 NUP37Q8NFH4 326 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 SLC26A7Q8TE54 656 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 ZNF607Q96SK3 696 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM27Q9HBJ8 222 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 LPAR3Q9UBY5 353 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.99□□□□□ -0.33
UPK3A-201ENST00000216211 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
UPK3A-201ENST00000216211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.33
UPK3A-201ENST00000216211 A0A087WUJ7 227 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 A0A0B4J2E0 115 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 LOC100289279A0A1B0GTE1 492 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 LOC102725191A0A1B0GVB3 256 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 A0A1B0GX12 115 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ZNF99A8MXY4 864 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 EVPLLA8MZ36 301 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 APEHP13798 732 aaKnown RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 GPX2P18283 190 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 TCN1P20061 433 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MSX2P35548 267 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ARR3P36575 388 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 GSK3BP49841 420 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 LIPEQ05469 1076 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MFSD13AQ14CX5 517 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ADRM1Q16186 407 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 FXNQ16595 210 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 RUNDC3AQ59EK9 446 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 FAM166AQ6J272 317 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ZFP1Q6P2D0 407 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 WDFY1Q8IWB7 410 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ZCCHC24Q8N2G6 241 aaKnown RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 SVOPLQ8N434 492 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 FAM156AQ8NDB6 213 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 BHLHE22Q8NFJ8 381 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MSI2Q96DH6 328 aaKnown RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 DUS3LQ96G46 650 aaKnown RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 SLC41A3Q96GZ6 507 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ANKRD27Q96NW4 1050 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MOGAT1Q96PD6 335 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 EPYCQ99645 322 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 SH3GL1Q99961 368 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 RAB1BQ9H0U4 201 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM38AQ9H6F2 299 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 ZNF442Q9H7R0 627 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MYOZ1Q9NP98 299 aaPredicted RBP12.98□□□□□ -0.33
UPK3A-201ENST00000216211 MED29Q9NX70 200 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 KCNS2Q9ULS6 477 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 USP22Q9UPT9 525 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 CORO2BQ9UQ03 480 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 GMEB1Q9Y692 573 aa12.98□□□□□ -0.33
UPK3A-201ENST00000216211 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM129A0AVI4 362 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 LRRN3E7EW58 273 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 H3BNX3 289 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 STAMBPO95630 424 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 HLA-HP01893 362 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 C8BP07358 591 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 CD79AP11912 226 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 NPR2P20594 1047 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 CDH12P55289 794 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 PMS2P3Q13401 168 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 SNTB2Q13425 540 aaKnown RBP12.97□□□□□ -0.33
UPK3A-201ENST00000216211 CAMK2DQ13557 499 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 RABL3Q5HYI8 236 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 KRT80Q6KB66 452 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 ARMC8Q8IUR7 673 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 C10orf53Q8N6V4 93 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 SMYD1Q8NB12 490 aa12.97□□□□□ -0.33
UPK3A-201ENST00000216211 HIPK4Q8NE63 616 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms