RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CLPPQ16740 277 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 TATDN3Q17R31 274 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZFP69Q49AA0 526 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ATAD3CQ5T2N8 411 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 OR5M10Q6IEU7 315 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SLC18B1Q6NT16 456 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DNM1P34Q6PK57 102 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 KRT74Q7RTS7 529 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 BPHLQ86WA6 291 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DUSP18Q8NEJ0 188 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 OR5H6Q8NGV6 325 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 OR6F1Q8NGZ6 308 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 OTOSQ8NHW6 89 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF519Q8TB69 540 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ADAMTS14Q8WXS8 1223 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 HSD17B8Q92506 261 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 CMTM3Q96MX0 182 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 GUCD1Q96NT3 240 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SPSB2Q99619 263 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 METTL7AQ9H8H3 244 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 NEK6Q9HC98 313 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SDHAF3Q9NRP4 125 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 NXT1Q9UKK6 140 aaKnown RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 NPIPA1Q9UND3 350 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 VDAC3Q9Y277 283 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 C19orf67A6NJJ6 358 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 FAM47E-STBD1D6RA91 191 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 PLPP3O14495 311 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SLC16A7O60669 478 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ONECUT2O95948 504 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SPARCP09486 303 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DUSP3P51452 185 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 GLO1Q04760 184 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 MELKQ14680 651 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 KCNJ8Q15842 424 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 BICRALQ6AI39 1079 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ASB18Q6ZVZ8 466 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DTX3Q8N9I9 347 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 MAFAQ8NHW3 353 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 HGDQ93099 445 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 TRIM63Q969Q1 353 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 CREB3L1Q96BA8 519 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 C5orf34Q96MH7 638 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 FAM210AQ96ND0 272 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ABCG5Q9H222 651 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 SLC26A1Q9H2B4 701 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 GALNT9Q9HCQ5 603 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 VSX1Q9NZR4 365 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 KCNG2Q9UJ96 466 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 B9D1Q9UPM9 204 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 V9GY05 133 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 A0A0B4J203 849 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 A0A1B0GVC2 190 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 A6NIN4 97 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ANXA2P2A6NMY6 339 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 IFITM5A6NNB3 132 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 CENPBD1B2RD01 187 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 D6RAR5 112 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MEN1O00255 615 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 SLC43A1O75387 559 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF254O75437 659 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ANXA2P07355 339 aaKnown RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 TFPIP10646 304 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MSX1P28360 303 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 RPS27P42677 84 aaKnown RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 SOX2P48431 317 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MMP15P51511 669 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MAP2K6P52564 334 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 NKX2-5P52952 324 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ADAM8P78325 824 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MRPS15P82914 257 aaKnown RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 TLE3Q04726 772 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 FOXF1Q12946 379 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 IL11RAQ14626 422 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 OR7A5Q15622 319 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 HES5Q5TA89 166 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 FAM69BQ5VUD6 431 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 FAM205BPQ63HN1 556 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 KCTD18Q6PI47 426 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 LRRN1Q6UXK5 716 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 TOMM5Q8N4H5 51 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 OR2G2Q8NGZ5 317 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MFSD8Q8NHS3 518 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 CEP76Q8TAP6 659 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 GPR148Q8TDV2 347 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 TSEN15Q8WW01 171 aaKnown RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 SLC7A6Q92536 515 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 RGP1Q92546 391 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 UPRTQ96BW1 309 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 C8orf44Q96CB5 159 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ZFP3Q96NJ6 502 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 WDR77Q9BQA1 342 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms