RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 BADQ92934 168 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 BMFQ96LC9 184 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 CCDC3Q9BQI4 270 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 TCEAL2Q9H3H9 227 aaPredicted RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZMAT3Q9HA38 289 aaKnown RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZC4H2Q9NQZ6 224 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 MTFP1Q9UDX5 166 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 OR6C65A6NJZ3 312 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 A8MXK9 166 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 K7EQS6 105 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ARPC3O15145 178 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 FOXS1O43638 330 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 APOC3P02656 99 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 LIPCP11150 499 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ACHEP22303 614 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZNF273Q14593 569 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 TMEM196Q5HYL7 178 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 NKAIN2Q5VXU1 208 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 YAF2Q8IY57 180 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 PHYHIPQ92561 330 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 NSMAFQ92636 917 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 RBM18Q96H35 190 aaKnown RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 VSTM2LQ96N03 204 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 SESN1Q9Y6P5 492 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ABHD16AO95870 558 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 PPP3CBP16298 524 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 GK2Q14410 553 aaPredicted RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 GRM7Q14831 915 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 RBMS2Q15434 407 aaKnown RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 BEX5Q5H9J7 111 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 B3GNTL1Q67FW5 361 aaPredicted RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 TMEM205Q6UW68 189 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 SLC35D2Q76EJ3 337 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 PARGQ86W56 976 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 EID2Q8N6I1 236 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 BVESQ8NE79 360 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 OR2G2Q8NGZ5 317 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 BAHD1Q8TBE0 780 aaPredicted RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 UTP23Q9BRU9 249 aaKnown RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 TMPRSS13Q9BYE2 586 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 MFFQ9GZY8 342 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 IGFLR1Q9H665 355 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 EXO5Q9H790 373 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 LAMP5Q9UJQ1 280 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ERVK-19Q9WJR5 959 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 SLC22A13Q9Y226 551 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 SERINC4A6NH21 518 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ELOA3DA6NLF2 546 aaPredicted RBP12.74□□□□□ -0.37
USH1C-201ENST00000005226 M0QYG6 137 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 XRCC3O43542 346 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CTAG2O75638 210 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ITGA5P08648 1049 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 TACSTD2P09758 323 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CT45A8P0DMV1 189 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CT45A9P0DMV2 189 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 MAOAP21397 527 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 GRK6P43250 576 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 POU3F4P49335 361 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CENPAP49450 140 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CD226Q15762 336 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ELOA3BQ3SY89 546 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ALG10Q5BKT4 473 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 CT45A2Q5DJT8 189 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 FAM122CQ6P4D5 195 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 BCORP1Q8N888 145 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 ELOA3Q8NG57 546 aa12.74□□□□□ -0.37
USH1C-201ENST00000005226 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 WISP1O95388 367 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 APBB3O95704 486 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 PLATP00750 562 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 CSRP1P21291 193 aaKnown RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 FAM122BQ7Z309 247 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 IQCF2Q8IXL9 164 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 KTI12Q96EK9 354 aaPredicted RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 MRPL48Q96GC5 212 aaKnown RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
USH1C-201ENST00000005226 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 FBXO4Q9UKT5 387 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 TRBV5-5A0A0J9YX44 114 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 A6NCN8 305 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 TUBAL3A6NHL2 446 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 NPIPB9F8W1W9 429 aa12.73□□□□□ -0.37
USH1C-201ENST00000005226 H3BUI4 141 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms