RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRIM3O75382 744 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 PLGP00747 810 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 GYPBP06028 91 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 MRPL3P09001 348 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 IL11P20809 199 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 UQCRC1P31930 480 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SDC2P34741 201 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SFTPDP35247 375 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 EIF1P41567 113 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 RRADP55042 308 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 OR2B6P58173 313 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TAS2R43P59537 309 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 GPR85P60893 370 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 FOXK1P85037 733 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SCN1BQ07699 218 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 LGALS3BPQ08380 585 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 POU4F2Q12837 409 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SRSF6Q13247 344 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF79Q15937 498 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SOWAHCQ53LP3 525 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 AGAP6Q5VW22 663 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 LIPKQ5VXJ0 399 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 RAET1LQ5VY80 246 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 C3orf33Q6P1S2 294 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 LEG1Q6P5S2 330 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TMEM81Q6P7N7 255 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 CCBE1Q6UXH8 406 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 B3GLCTQ6Y288 498 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 DTX1Q86Y01 620 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ARMC10Q8N2F6 343 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ARIH2OSQ8N7S6 290 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SCAIQ8N9R8 606 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 LSM14AQ8ND56 463 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF248Q8NDW4 579 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 FAM83FQ8NEG4 500 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 OR4F15Q8NGB8 312 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 OR51G2Q8NGK0 314 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF417Q8TAU3 575 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 POC1BQ8TC44 478 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 LIPHQ8WWY8 451 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SMPDL3BQ92485 455 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 PSMF1Q92530 271 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZBTB8AQ96BR9 441 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 KCTD12Q96CX2 325 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZC3HAV1LQ96H79 300 aaKnown RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TMEM41AQ96HV5 264 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 Q96M85 177 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 C5orf34Q96MH7 638 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 AGAP4Q96P64 663 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 OR5B2Q96R09 309 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF587Q96SQ5 575 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SOSTQ9BQB4 213 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF649Q9BS31 505 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TRAF4Q9BUZ4 470 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 PTDSS2Q9BVG9 487 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 HCAR1Q9BXC0 346 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 MFRPQ9BY79 579 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 KCNN2Q9H2S1 579 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 RNF167Q9H6Y7 350 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 SH2D2AQ9NP31 389 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 INIPQ9NRY2 104 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 HAO2Q9NYQ3 351 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 PLA2G3Q9NZ20 509 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TNFRSF10DQ9UBN6 386 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-219ENST00000641513 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
PHGDH-219ENST00000641513 TNRC6AQ8NDV7 1962 aaKnown RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 A0A0G2JMM0 328 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 A0A1W2PPB8 328 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 A0A1W2PRG6 482 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 A0A1W2PRS3 328 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 KIR3DP1A8MWS1 328 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 CTDSP2O14595 271 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 XKRYO14609 159 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ARPC3O15145 178 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NKX2-8O15522 239 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ARHGEF9O43307 516 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 GFRA3O60609 400 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 SLC19A2O60779 497 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NPIPB7O75200 414 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 CBR3O75828 277 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TRAPPC6AO75865 159 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 RENP00797 406 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 CD1AP06126 327 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 CLUP10909 449 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 IL7P13232 177 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 SDHAP31040 664 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ACVR1BP36896 505 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 CD96P40200 585 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MTNR1BP49286 362 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 DSCR4P56555 118 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ACTC1P68032 377 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ACTA1P68133 377 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NHLH1Q02575 133 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TLE3Q04726 772 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 DBPQ10586 325 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 SELENBP1Q13228 472 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MFSD13AQ14CX5 517 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 BCL2A1Q16548 175 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms