RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TNFAIP8L1Q8WVP5 186 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 G6PC3Q9BUM1 346 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 CYP8B1Q9UNU6 501 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 CABIN1Q9Y6J0 2220 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 EFNB2P52799 333 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 Q499Y3 187 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 PRAMEF17Q5VTA0 474 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 FAM198BQ6UWH4 519 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 PM20D2Q8IYS1 436 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 ANGPTL6Q8NI99 470 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 DIABLOQ9NR28 239 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 RP1P56715 2156 aa13.29□□□□□ -0.28
SCARB2-221ENST00000640341 ASXL3Q9C0F0 2248 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 FANCMQ8IYD8 2048 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 EPOPA6NHQ4 379 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 HCRTR2O43614 444 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 PRAMEF2O60811 474 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 AKR7A3O95154 331 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 HIST1H2ABP04908 130 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 TACSTD2P09758 323 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 DLX2Q07687 328 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-221ENST00000640341 BIKQ13323 160 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
SCARB2-221ENST00000640341 HIST3H2AQ7L7L0 130 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 OR6V1Q8N148 313 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 KDM8Q8N371 416 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 PLPP7Q8NBV4 271 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 HIST1H2ACQ93077 130 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 NKD1Q969G9 470 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 ZNF524Q96C55 264 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 AMELYQ99218 206 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 PCOLCE2Q9UKZ9 415 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 PIAS3Q9Y6X2 628 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 C17orf105B2RV13 164 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 GPRIN2O60269 458 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 PPM1BO75688 479 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 ECDO95905 644 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-221ENST00000640341 LIPCP11150 499 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 GTF2F2P13984 249 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 C4orf46Q504U0 113 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 LINC01590Q5TEZ4 76 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 LPAR4Q99677 370 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 ARL6Q9H0F7 186 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 ICAM5Q9UMF0 924 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 SLC22A13Q9Y226 551 aa13.28□□□□□ -0.28
SCARB2-221ENST00000640341 IGKV1D-42A0A075B6H8 117 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 OR5K3A6NET4 321 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 SCDO00767 359 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 RBBP9O75884 186 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 ATF4P18848 351 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 TNFRSF4P43489 277 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 OR1D4P47884 311 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 PRPS1P60891 318 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 RPL18Q07020 188 aaKnown RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 MELKQ14680 651 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 DHRS9Q9BPW9 319 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 SEMA4FO95754 770 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 CD14P08571 375 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 THEGLP0DJG4 465 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 CXCL2P19875 107 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 TACR3P29371 465 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 AANATQ16613 207 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 C19orf47Q8N9M1 422 aaKnown RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 GALNT11Q8NCW6 608 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 TGM7Q96PF1 710 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 GSX2Q9BZM3 304 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 COMMD4Q9H0A8 199 aa13.27□□□□□ -0.28
SCARB2-221ENST00000640341 TMEM184BQ9Y519 407 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-221ENST00000640341 GOSR2O14653 212 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 OR6A2O95222 327 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 SPARCP09486 303 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 BAIAP2L2Q6UXY1 529 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF627Q7L945 461 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 DND1Q8IYX4 353 aaKnown RBP13.27□□□□□ -0.29
SCARB2-221ENST00000640341 GABRG3Q99928 467 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 RTTNQ86VV8 2226 aa13.27□□□□□ -0.29
SCARB2-221ENST00000640341 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 G3V3Q6 166 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 ACOT7O00154 380 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 LGALS8O00214 317 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 CTNSO60931 367 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 FOXL2P58012 376 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 TOMM34Q15785 309 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 MEP1BQ16820 701 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 LRRC37A5PQ49AS3 106 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 C3P1Q6ZMU1 363 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 GRAMD2AQ8IUY3 354 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 OR51S1Q8NGJ8 323 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 HGDQ93099 445 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 TRAF4Q9BUZ4 470 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 NXF5Q9H1B4 397 aaKnown RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 GPN1Q9HCN4 374 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms