RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ASB6Q9NWX5 421 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 FOXD3Q9UJU5 478 aaPredicted RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 MGAT4BQ9UQ53 548 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 HELZ2Q9BYK8 2649 aaKnown RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 MYO18BQ8IUG5 2567 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ARRDC5A6NEK1 342 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 M0R3G1 203 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 PDLIM1O00151 329 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 KRT33AO76009 404 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 SOX14O95416 240 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 CNOT4O95628 575 aaKnown RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 IGHMP01871 453 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 TP53P04637 393 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 CD14P08571 375 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ITGA5P08648 1049 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 PGA4P0DJD7 388 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 PGA3P0DJD8 388 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF23P17027 643 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 IGFBP2P18065 325 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 UGT2B10P36537 528 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ACVR1BP36896 505 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 DAP3P51398 398 aaKnown RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ARHGDIAP52565 204 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ITGADQ13349 1161 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 RFX4Q33E94 735 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ARMC4Q5T2S8 1044 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 SFRP5Q5T4F7 317 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 RASSF6Q6ZTQ3 369 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 C22orf34Q6ZV56 151 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 C20orf196Q8IYI0 205 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 GPR137CQ8N3F9 429 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF433Q8N7K0 673 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 OR8D4Q8NGM9 314 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 OR6N1Q8NGY5 312 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 HDAC2Q92769 488 aaKnown RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF837Q96EG3 531 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 SLC25A44Q96H78 314 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 GPX7Q96SL4 187 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 LINC00470Q9BZP3 86 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 NRIP3Q9NQ35 241 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 CDH10Q9Y6N8 788 aa11.63□□□□□ -0.55
GTF3A-209ENST00000640289 USP9XQ93008 2570 aaPredicted RBP11.63□□□□□ -0.55
GTF3A-209ENST00000640289 INTS1Q8N201 2190 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 TEX13CA0A0J9YWL9 993 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 NPIPB13A6NJU9 1138 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 OR6C65A6NJZ3 312 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 NPIPB4C9JG80 1138 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 RAD51DO75771 328 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 PPP1R3DO95685 299 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ANXA8P13928 327 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ACADSP16219 412 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CDH2P19022 906 aaPredicted RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 COX5AP20674 150 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 GSTM3P21266 225 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CSNK1A1P48729 337 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 SORDQ00796 357 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 MYBPC1Q00872 1141 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 P2RY6Q15077 328 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 TAF11Q15544 211 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CLEC12AQ5QGZ9 265 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 KLHL17Q6TDP4 642 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 MEX3BQ6ZN04 569 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 DPY19L2P2Q6ZN68 376 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 BHLHA15Q7RTS1 189 aaPredicted RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 FAM122BQ7Z309 247 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 DMRTC2Q8IXT2 367 aaPredicted RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CLDN22Q8N7P3 220 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 SYT14Q8NB59 555 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ACBD4Q8NC06 268 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF519Q8TB69 540 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 TMEM54Q969K7 222 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF566Q969W8 418 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 RASD2Q96D21 266 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 NRBF2Q96F24 287 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CENPNQ96H22 339 aaPredicted RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 Q96M85 177 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 MRPL13Q9BYD1 178 aaKnown RBP11.62□□□□□ -0.55
GTF3A-209ENST00000640289 CRLF2Q9HC73 371 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 GPR35Q9HC97 309 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 TAS2R16Q9NYV7 291 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 GLTPQ9NZD2 209 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 IER3IP1Q9Y5U9 82 aa11.62□□□□□ -0.55
GTF3A-209ENST00000640289 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 GCN1Q92616 2671 aaKnown RBP11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF587BE7ETH6 402 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 G3V2T6 193 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 H7C1C5 153 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 IGHG1P01857 330 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms