RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 ZBED5Q49AG3 693 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 FAM74A1Q5RGS3 127 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 C1QL3Q5VWW1 255 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 Q6ZNB5 142 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLCO6A1Q86UG4 719 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 FAM26EQ8N5C1 309 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LSM14AQ8ND56 463 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 OR51G2Q8NGK0 314 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ITFG2Q969R8 447 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC35A4Q96G79 324 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ABHD17AQ96GS6 310 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 AKTIPQ9H8T0 292 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ACSS1Q9NUB1 689 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 B3GALT5Q9Y2C3 310 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF337Q9Y3M9 751 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CDH10Q9Y6N8 788 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PHF3Q92576 2039 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LAMB1P07942 1786 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SERINC4A6NH21 518 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 H3BSH0 61 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SHOX2O60902 331 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF728P0DKX0 622 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NAGAP17050 411 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RAB7AP51149 207 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RNF4P78317 190 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 KCNJ10P78508 379 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MAB21L1Q13394 359 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SPINK14Q6IE38 97 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF662Q6ZS27 426 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 Q6ZTK2 550 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LACC1Q8IV20 430 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 OR8H3Q8N146 312 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 OR5W2Q8NH69 310 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 DYNLRB2Q8TF09 96 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC38A5Q8WUX1 472 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TMIGD2Q96BF3 282 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 GALNT9Q9HCQ5 603 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NDUFAF4Q9P032 175 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CTSFQ9UBX1 484 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ACSL6Q9UKU0 697 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TMA7Q9Y2S6 64 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 DOCK11Q5JSL3 2073 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NCBP2LA6PVI3 153 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ATP6V1G2-DDX39BF2Z307 99 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CDK2AP1O14519 115 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NOBOXO60393 691 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ATP6V1G2O95670 118 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 AIFM1O95831 613 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ADH4P08319 380 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EDN3P14138 238 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 POU3F3P20264 500 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CAPN3P20807 821 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 HLA-DMAP28067 261 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SNCAP37840 140 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LIPAP38571 399 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ARSDP51689 593 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MAP2K6P52564 334 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 KLF3P57682 345 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MVKQ03426 396 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PRKCDQ05655 676 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 GRK1Q15835 563 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CCDC58Q4VC31 144 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CLVS2Q5SYC1 327 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PAQR9Q6ZVX9 377 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NAT8LQ8N9F0 302 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ACBD4Q8NC06 268 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RAB2BQ8WUD1 216 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ST8SIA4Q92187 359 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LPAR2Q9HBW0 351 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LIN7CQ9NUP9 197 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 KLK13Q9UKR3 277 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TRAPPC2LQ9UL33 140 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 IGHV5-51A0A0C4DH38 117 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LOC285095A0A1B0GVY8 99 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LRRN3E7EW58 273 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 YIF1AO95070 293 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NPPAP01160 153 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PTNP21246 168 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EVI2BP34910 448 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ALDH3B1P43353 468 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 GCGRP47871 477 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NKX6-1P78426 367 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 KLF10Q13118 480 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 INPP5JQ15735 1006 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC6A19Q695T7 634 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RAB12Q6IQ22 244 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 GTF2H5Q6ZYL4 71 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC51BQ86UW2 128 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 VRK2Q86Y07 508 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 AQP11Q8NBQ7 271 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SYNPRQ8TBG9 265 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ST8SIA1Q92185 356 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EID2BQ96D98 161 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 BSCL2Q96G97 398 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF436Q9C0F3 470 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MARCH4Q9P2E8 410 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MCRIP1C9JLW8 97 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 F2RL2O00254 374 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SCAMP2O15127 329 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A1O15245 554 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms