RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 TMEM129A0AVI4 362 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 MS4A18H0YCH9 400 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 ZNF701M0R085 212 aaPredicted RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 MYL12BO14950 172 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 AKR7A3O95154 331 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 SPI1P17947 270 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 EIF2S3P41091 472 aaKnown RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 CENPAP49450 140 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 UCNP55089 124 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 RPS7P62081 194 aaKnown RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 ACTC1P68032 377 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 ACTA1P68133 377 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 H3F3AP84243 136 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 POU3F1Q03052 451 aaPredicted RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 POU4F3Q15319 338 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 MS4A18Q3C1V0 323 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 KLHL12Q53G59 568 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 WIPI1Q5MNZ9 446 aaPredicted RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 PDSS1Q5T2R2 415 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 GGNQ86UU5 652 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 UEVLDQ8IX04 471 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 EXD3Q8N9H8 876 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 OR2T4Q8NH00 348 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 ASB10Q8WXI3 467 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 DNAJA3Q96EY1 480 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 ADGRG7Q96K78 797 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 TEAD3Q99594 435 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 NAA11Q9BSU3 229 aaPredicted RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
CLN6-219ENST00000637329 B3GAT1Q9P2W7 334 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 TNFRSF10DQ9UBN6 386 aa13.75□□□□□ -0.21
CLN6-219ENST00000637329 A0A087WV48 116 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 PRSS37A4D1T9 235 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 OR6C68A6NDL8 312 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 J3QRE1 110 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 SERPINI2O75830 405 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 GLCEO94923 617 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 PLGP00747 810 aaPredicted RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 GSTT1P30711 240 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 ACVR1BP36896 505 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 CDKN2AP42771 156 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 MAGEA5P43359 124 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 MAP2K4P45985 399 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 AGFG1P52594 562 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 GP2P55259 537 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 RAC3P60763 192 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 PPIAP62937 165 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 PON3Q15166 354 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 LRRC69Q6ZNQ3 347 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 TMEM99Q8N816 258 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 OR9Q1Q8NGQ5 310 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 OR2V1Q8NHB1 315 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 ZNF420Q8TAQ5 688 aaPredicted RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 SMPDL3BQ92485 455 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 OXGR1Q96P68 337 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 CNN2Q99439 309 aaKnown RBP13.74□□□□□ -0.21
CLN6-219ENST00000637329 OR51V1Q9H2C8 321 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 TIGARQ9NQ88 270 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 FKBP7Q9Y680 259 aa13.74□□□□□ -0.21
CLN6-219ENST00000637329 A0A0J9YW62 118 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 FAM166BA8MTA8 275 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 CENPBD1B2RD01 187 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 TRAF3IP2O43734 574 aaPredicted RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 BCL10O95999 233 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 ACTL6AO96019 429 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 PTHP01270 115 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 NR2C1P13056 603 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 PSMB9P28065 219 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 ATP6V1E1P36543 226 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 CAPZA2P47755 286 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 BLVRAP53004 296 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 SLC16A1P53985 500 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 BCL2A1Q16548 175 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 HBMQ6B0K9 141 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 ZADH2Q8N4Q0 377 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 OR51G2Q8NGK0 314 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 CPNE4Q96A23 557 aaPredicted RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 ADAD1Q96M93 576 aaKnown RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 MYCBPQ99417 103 aaPredicted RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 ALG12Q9BV10 488 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 SF3B5Q9BWJ5 86 aaKnown RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 ADGRL4Q9HBW9 690 aa13.73□□□□□ -0.21
CLN6-219ENST00000637329 RPRD1BQ9NQG5 326 aaKnown RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 PAQR5Q9NXK6 330 aaPredicted RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 LSM2Q9Y333 95 aaKnown RBP13.73□□□□□ -0.21
CLN6-219ENST00000637329 MED13Q9UHV7 2174 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 K7ENP7 123 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 EIF1AYO14602 144 aaKnown RBP13.72□□□□□ -0.21
CLN6-219ENST00000637329 TNFSF11O14788 317 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ARHGEF9O43307 516 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms