RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZNF501Q96CX3 271 aaPredicted RBP17.08■□□□□ 0.33
CLN5-216ENST00000636780 ARL5BQ96KC2 179 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 MARVELD1Q9BSK0 173 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 LIN7BQ9HAP6 207 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 NPAP1Q9NZP6 1156 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 MYEF2Q9P2K5 600 aaKnown RBP17.08■□□□□ 0.33
CLN5-216ENST00000636780 LAMP5Q9UJQ1 280 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 CACNG2Q9Y698 323 aa17.08■□□□□ 0.33
CLN5-216ENST00000636780 ZNF879B4DU55 563 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 PNMTP11086 282 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 GALP22466 123 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 SLC6A1P30531 599 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 SHBQ15464 509 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 FCN2Q15485 313 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 SLC6A19Q695T7 634 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 LINGO2Q7L985 606 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 SEMA4CQ9C0C4 833 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 CACNA1EQ15878 2313 aa17.08■□□□□ 0.32
CLN5-216ENST00000636780 DUX1O43812 170 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ZNF684Q5T5D7 378 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 TPRA1Q86W33 373 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 SYS1Q8N2H4 156 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 STT3BQ8TCJ2 826 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
CLN5-216ENST00000636780 ADAM19Q9H013 955 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 MED11Q9P086 117 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 SUSD5O60279 629 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 GMDSO60547 372 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 TSPAN2O60636 221 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 SLC16A7O60669 478 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 GAAP10253 952 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ACKR1Q16570 336 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 PLA1AQ53H76 456 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ARSKQ6UWY0 536 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ADGRG3Q86Y34 549 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 TOMM5Q8N4H5 51 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ZNF578Q96N58 590 aaPredicted RBP17.07■□□□□ 0.32
CLN5-216ENST00000636780 PTDSS2Q9BVG9 487 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 TMEM185BQ9H7F4 350 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 EPHA6Q9UF33 1036 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 ZNF281Q9Y2X9 895 aa17.07■□□□□ 0.32
CLN5-216ENST00000636780 MASP2O00187 686 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 SOX1O00570 391 aaPredicted RBP17.06■□□□□ 0.32
CLN5-216ENST00000636780 IFI6P09912 130 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 CXCL3P19876 107 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 CFL1P23528 166 aaKnown RBP17.06■□□□□ 0.32
CLN5-216ENST00000636780 RBMS1P29558 406 aaKnown RBP17.06■□□□□ 0.32
CLN5-216ENST00000636780 GPLD1P80108 840 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 FMODQ06828 376 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 PRSS35Q8N3Z0 413 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 D2HGDHQ8N465 521 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 PHF21AQ96BD5 680 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 SLC25A38Q96DW6 304 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 OR6C1Q96RD1 312 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 FAM199XQ6PEV8 388 aaPredicted RBP17.06■□□□□ 0.32
CLN5-216ENST00000636780 CADM4Q8NFZ8 388 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 OR1N1Q8NGS0 311 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 ADAMTS18Q8TE60 1221 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 UCK1Q9HA47 277 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 COPS7AQ9UBW8 275 aa17.06■□□□□ 0.32
CLN5-216ENST00000636780 MEIS3P1A6NDR6 274 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 H3BML4 177 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 ZNF593O00488 134 aaPredicted RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 TSC22D2O75157 780 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 SLC25A12O75746 678 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 ARL6IP5O75915 188 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 PNPP00491 289 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 BGLAPP02818 100 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 GLB1P16278 677 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 CTLA4P16410 223 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 AFF3P51826 1226 aaKnown RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 SLITRK4Q8IW52 837 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 ZNF417Q8TAU3 575 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 METTL21AQ8WXB1 218 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 NSMAFQ92636 917 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 ZNF587Q96SQ5 575 aaPredicted RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 CDCP1Q9H5V8 836 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 CEP192Q8TEP8 1941 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 TMED7-TICAM2A0A0A6YYA0 188 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 A0A1B0GX78 115 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 IFITM5A6NNB3 132 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 DHPSP49366 369 aaPredicted RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 RIN1Q13671 783 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 CDK10Q15131 360 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 COL28A1Q2UY09 1125 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 SLC29A4Q7RTT9 530 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 SLC16A9Q7RTY1 509 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 OR52I2Q8NH67 350 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 OR2B2Q9GZK3 357 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 LAT2Q9GZY6 243 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 TMED7Q9Y3B3 224 aa17.05■□□□□ 0.32
CLN5-216ENST00000636780 PCDHGA9Q9Y5G4 932 aaKnown RBP17.05■□□□□ 0.32
CLN5-216ENST00000636780 TRAV1-2A0A0B4J238 106 aa17.04■□□□□ 0.32
CLN5-216ENST00000636780 SPARCP09486 303 aa17.04■□□□□ 0.32
CLN5-216ENST00000636780 INSM1Q01101 510 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms