RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PCOLCEQ15113 449 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 CEBPEQ15744 281 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 FAM69AQ5T7M9 428 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 MED25Q71SY5 747 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 GDF7Q7Z4P5 450 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 NKAIN4Q8IVV8 208 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 OR4N5Q8IXE1 308 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 ZNF595Q8IYB9 648 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 PLPP5Q8NEB5 264 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 BBS1Q8NFJ9 593 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 OR11H4Q8NGC9 324 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 ABHD4Q8TB40 342 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 HAVCR2Q8TDQ0 301 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 CACNA1GO43497 2377 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 LOC102723996A0A087X1L8 192 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 IGHV1-45A0A0A0MS14 117 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 A0A0G2JK05 382 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 RPS10-NUDT3A0A1W2PQS6 291 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 FGF17O60258 216 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 BMP7P18075 431 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 RAB3BP20337 219 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 HSD17B7P56937 341 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 ACTC1P68032 377 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 ACTA1P68133 377 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 LGALSLQ3ZCW2 172 aaPredicted RBP14.07□□□□□ -0.16
CLN8-209ENST00000635970 EIPR1Q53HC9 387 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 DCAF10Q5QP82 559 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 C16orf62Q7Z3J2 963 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 CEACAM19Q7Z692 300 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 COMMD7Q86VX2 200 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 VRK2Q86Y07 508 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 NUP43Q8NFH3 380 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 WDR77Q9BQA1 342 aaPredicted RBP14.07□□□□□ -0.16
CLN8-209ENST00000635970 ACTRT3Q9BYD9 372 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 GSX2Q9BZM3 304 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 MTHFD2LQ9H903 347 aaPredicted RBP14.07□□□□□ -0.16
CLN8-209ENST00000635970 ZNF160Q9HCG1 818 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 DLL4Q9NR61 685 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 KIF25Q9UIL4 384 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 MMACHCQ9Y4U1 282 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 TNRC6AQ8NDV7 1962 aaKnown RBP14.07□□□□□ -0.16
CLN8-209ENST00000635970 A0A1W2PS29 197 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 TCRBV16S1A1N1A0A5B0 115 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 A8MUA0 341 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 CLDN4O14493 209 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 RCBTB2O95199 551 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 TGM6O95932 706 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 CELA2AP08217 269 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 GIFP27352 417 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 GPR4P46093 362 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 NRG3P56975 720 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 POU4F2Q12837 409 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 EXOSC2Q13868 293 aaKnown RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 FGFBP1Q14512 234 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 MAPK14Q16539 360 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 AANATQ16613 207 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 HEPHL1Q6MZM0 1159 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 RTL4Q6ZR62 310 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 CPEB2Q7Z5Q1 589 aaKnown RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 LNX2Q8N448 690 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 UXS1Q8NBZ7 420 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 FAM98AQ8NCA5 519 aaKnown RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 ANKRD9Q96BM1 317 aaPredicted RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 SAMD8Q96LT4 415 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 IP6K3Q96PC2 410 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 TIMP4Q99727 224 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 YIPF4Q9BSR8 244 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 HAO2Q9NYQ3 351 aa14.06□□□□□ -0.16
CLN8-209ENST00000635970 GPR55Q9Y2T6 319 aaPredicted RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 SIRT4Q9Y6E7 314 aaPredicted RBP14.06□□□□□ -0.16
CLN8-209ENST00000635970 NSG1A0A0A6YYJ2 146 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 UNC119BA6NIH7 251 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 ERAL1O75616 437 aaKnown RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 ECDO95905 644 aaPredicted RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 CD1AP06126 327 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 CYC1P08574 325 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 ZNF81P51508 661 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 RPS7P62081 194 aaKnown RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 Q0VFX4 171 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 SNTB2Q13425 540 aaKnown RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 LINC00303Q3SY05 128 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 SLC48A1Q6P1K1 146 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 PLBD1Q6P4A8 553 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 MEX3DQ86XN8 651 aaKnown RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 SIAH3Q8IW03 269 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 CCDC116Q8IYX3 515 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 SLC43A2Q8N370 569 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 ELP4Q96EB1 424 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 OR52D1Q9H346 318 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 C19orf25Q9UFG5 118 aaPredicted RBP14.05□□□□□ -0.16
CLN8-209ENST00000635970 CES1P1Q9UKY3 287 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 LHX6Q9UPM6 363 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 CHST2Q9Y4C5 530 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 BHLHE40O14503 412 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 CTNSO60931 367 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 ARL6IP5O75915 188 aa14.05□□□□□ -0.16
CLN8-209ENST00000635970 CXCL3P19876 107 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms