RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 WBP4O75554 376 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 KBTBD11O94819 623 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 RENP00797 406 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ALPIP09923 528 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SLC2A3P11169 496 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 GCFC2P16383 781 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 GNA11P29992 359 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 NMT1P30419 496 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ARL2P36404 184 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 OPRD1P41143 372 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 TUFMP49411 452 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 EFNB2P52799 333 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SMARCB1Q12824 385 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SFT2D3Q587I9 215 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 PAQR6Q6TCH4 344 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ALKAL1Q6UXT8 129 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZYG11AQ6WRX3 759 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF600Q6ZNG1 722 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 STXBP4Q6ZWJ1 553 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 OTUD6AQ7L8S5 288 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 CTAGE6Q86UF2 777 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SLC25A42Q86VD7 318 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SERPINA9Q86WD7 417 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF440Q8IYI8 595 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 MCOLN2Q8IZK6 566 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 CSNK1A1LQ8N752 337 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 C17orf47Q8NEP4 570 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF671Q8TAW3 534 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 SETD7Q8WTS6 366 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 RNF139Q8WU17 664 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 CCDC12Q8WUD4 166 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 TCTEX1D2Q8WW35 142 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ITLN1Q8WWA0 313 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 NR4A3Q92570 626 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 MRPS31Q92665 395 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 TOMM40LQ969M1 308 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 PPP1R16AQ96I34 528 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF578Q96N58 590 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 NPY6RQ99463 290 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 CITED1Q99966 193 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 CCDC77Q9BR77 488 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 GON7Q9BXV9 100 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 PARD6BQ9BYG5 372 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 MCCC2Q9HCC0 563 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 XPNPEP1Q9NQW7 623 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 PNO1Q9NRX1 252 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 WRAP73Q9P2S5 460 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZFHX3Q15911 3703 aa3.96□□□□□ -1.78
TRAPPC9-216ENST00000634178 KNL1Q8NG31 2342 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SMIM28A0A1B0GU29 152 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 H3BMQ9 156 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 K7ENP7 123 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SGK1O00141 431 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 RS1O15537 224 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 B4GALT5O43286 388 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 CHMP2AO43633 222 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 EFNA2O43921 213 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 DFNA5O60443 496 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 LYPLA2O95372 231 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 HPP00738 406 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 CA1P00915 261 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 IGHV3-13P01766 116 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 PIGRP01833 764 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 IGHG3P01860 377 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 HOXD4P09016 255 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 UMPSP11172 480 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SFTPCP11686 197 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 KCNE1P15382 129 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 BCL3P20749 454 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 FNTAP49354 379 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ERVPABLB-1P60509 514 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SEMG2Q02383 582 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ILKQ13418 452 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ELAVL3Q14576 367 aaKnown RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF77Q15935 545 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF57Q68EA5 555 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 LEMD1Q68G75 181 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 OR4F3Q6IEY1 312 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 OR8J1Q8NGP2 316 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 C2orf15Q8WU43 125 aaKnown RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ZNF599Q96NL3 588 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 COPS8Q99627 209 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SLC35A5Q9BS91 424 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 NAT10Q9H0A0 1025 aaKnown RBP3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 C6orf50Q9HD87 102 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 CUTCQ9NTM9 273 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SLC2A6Q9UGQ3 507 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 SCML2Q9UQR0 700 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 L3MBTL1Q9Y468 752 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ANAPC1Q9H1A4 1944 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 ICE1Q9Y2F5 2266 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
TRAPPC9-216ENST00000634178 TLN1Q9Y490 2541 aaKnown RBP3.94□□□□□ -1.78
TRAPPC9-216ENST00000634178 LRP5LA4QPB2 252 aa3.94□□□□□ -1.78
TRAPPC9-216ENST00000634178 ACOD1A6NK06 481 aa3.94□□□□□ -1.78
TRAPPC9-216ENST00000634178 SNTNA6NMZ2 147 aa3.94□□□□□ -1.78
TRAPPC9-216ENST00000634178 PP2D1A8MPX8 630 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms