RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ATP6V1E1P36543 226 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 TGFBR2P37173 567 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SELENBP1Q13228 472 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 KLHL12Q53G59 568 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 GPR107Q5VW38 600 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 MEPCEQ7L2J0 689 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SHFQ7M4L6 423 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SDR9C7Q8NEX9 313 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 Q96M85 177 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 UTP23Q9BRU9 249 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 FGF20Q9NP95 211 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 CHCHD3Q9NX63 227 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 ERGIC3Q9Y282 383 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 TEX13CA0A0J9YWL9 993 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 OR6C68A6NDL8 312 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF701M0R085 212 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 PLPP3O14495 311 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RNF13O43567 381 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 SERPINI2O75830 405 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TXNDC12O95881 172 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GYPBP06028 91 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RFPL3SP0C7P2 107 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 EDN3P14138 238 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MYL12AP19105 171 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 AHCYP23526 432 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LIPAP38571 399 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CD79BP40259 229 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CDKN2AP42771 156 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ETV1P50549 477 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC16A1P53985 500 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RPS7P62081 194 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 FOXO1Q12778 655 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TMED1Q13445 227 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 OR7A5Q15622 319 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 EMC4Q5J8M3 183 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ARMC4Q5T2S8 1044 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RAET1LQ5VY80 246 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RNLSQ5VYX0 342 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 SPINK14Q6IE38 97 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TUBA3EQ6PEY2 450 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 IGFL2Q6UWQ7 119 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 JAZF1Q86VZ6 243 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GTPBP8Q8N3Z3 284 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 SCAIQ8N9R8 606 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF485Q8NCK3 441 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 OR4F15Q8NGB8 312 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF420Q8TAQ5 688 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 YIPF6Q96EC8 236 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 DTNBP1Q96EV8 351 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 NMNAT3Q96T66 252 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TIMP4Q99727 224 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 FUNDC2Q9BWH2 189 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MND1Q9BWT6 205 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 OR51V1Q9H2C8 321 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 RPH3AQ9Y2J0 694 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 A0A1B0GUH1 482 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LIPT2A6NK58 231 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 C11orf98E9PRG8 122 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MS4A18H0YCH9 400 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 H3BMQ9 156 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CDK2AP1O14519 115 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MYL12BO14950 172 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TRMUO75648 421 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 WDPCPO95876 746 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 IGHA1P01876 353 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 OPN1LWP04000 364 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LIMS3P0CW19 117 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LIMS4P0CW20 117 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF17P17021 662 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CNR1P21554 472 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 SRD5A2P31213 254 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 CLK1P49759 484 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 P2RY4P51582 365 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 B3GALT5-AS1P59052 145 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GPR85P60893 370 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LGALS3BPQ08380 585 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MYBPHQ13203 477 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TOMM20Q15388 145 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MED22Q15528 200 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 TIGD6Q17RP2 521 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MS4A18Q3C1V0 323 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GLYR1Q49A26 553 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 MESTQ5EB52 335 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 AGAP7PQ5VUJ5 663 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 GPR139Q6DWJ6 353 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 NHLRC1Q6VVB1 395 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 LINC00696Q6ZRV3 163 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF367Q7RTV3 350 aa8.51□□□□□ -1.05
PDLIM5-223ENST00000627587 NANOGP1Q8N7R0 232 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms