RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SAMHD1Q9Y3Z3 626 aaKnown RBP17.87■□□□□ 0.45
PTCD3-220ENST00000627371 RPL36A-HNRNPH2H7BZ11 118 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 FKBP6O75344 327 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 RAD51DO75771 328 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 CST1P01037 141 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 SSTR2P30874 369 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 TGFBR3Q03167 851 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 GK3PQ14409 553 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 DAZAP2Q15038 168 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-220ENST00000627371 CARD17Q5XLA6 110 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 C1orf94Q6P1W5 598 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 HDDC2Q7Z4H3 204 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 GPR137CQ8N3F9 429 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 C1orf162Q8NEQ5 155 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-220ENST00000627371 ASB10Q8WXI3 467 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 GPA33Q99795 319 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 MCCC2Q9HCC0 563 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 SIGLEC7Q9Y286 467 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 ABCA4P78363 2273 aa17.86■□□□□ 0.45
PTCD3-220ENST00000627371 CIB4A0PJX0 185 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 MCIDASD6RGH6 385 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 PTP4A3O75365 173 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 IGHMP01871 453 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 THBDP07204 575 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 PRF1P14222 555 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 FPR3P25089 353 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 ROR2Q01974 943 aaKnown RBP17.85■□□□□ 0.45
PTCD3-220ENST00000627371 PPP1R8Q12972 351 aaKnown RBP17.85■□□□□ 0.45
PTCD3-220ENST00000627371 CCNIQ14094 377 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 TAF11Q15544 211 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 GABRA6Q16445 453 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 ACKR1Q16570 336 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 PHYHD1Q5SRE7 291 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 C9orf135Q5VTT2 229 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 OR7E24Q6IFN5 339 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 HMBOX1Q6NT76 420 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 PGBD2Q6P3X8 592 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 YTHDF3Q7Z739 585 aaKnown RBP17.85■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF566Q969W8 418 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 SLC25A44Q96H78 314 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-220ENST00000627371 ZC3HAV1LQ96H79 300 aaKnown RBP17.85■□□□□ 0.45
PTCD3-220ENST00000627371 MUS81Q96NY9 551 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 NDEL1Q9GZM8 345 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 TXNIPQ9H3M7 391 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 GPR35Q9HC97 309 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 U3KQV3 271 aa17.85■□□□□ 0.45
PTCD3-220ENST00000627371 UNC119BA6NIH7 251 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 OR5H1A6NKK0 313 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 A6NNC1 897 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 M0R3G1 203 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 CASKO14936 926 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 CCNB2O95067 398 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 GOSR1O95249 250 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF26P17031 533 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-220ENST00000627371 CRYGSP22914 178 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 GSSP48637 474 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 CSNK1A1P48729 337 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 CTXN1P60606 82 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 TLE4Q04727 773 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 TAB1Q15750 504 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 STK11Q15831 433 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 TIMM23BQ5SRD1 257 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 ARMC4Q5T2S8 1044 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF770Q6IQ21 691 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-220ENST00000627371 IGFN1Q86VF2 1251 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 P2RY8Q86VZ1 359 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 C17orf78Q8N4C9 275 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 OR9Q2Q8NGE9 314 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 OR6N1Q8NGY5 312 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 GNPDA2Q8TDQ7 276 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 HSD17B8Q92506 261 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 TMEM54Q969K7 222 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 B3GAT2Q9NPZ5 323 aa17.84■□□□□ 0.45
PTCD3-220ENST00000627371 STX18Q9P2W9 335 aaKnown RBP17.84■□□□□ 0.45
PTCD3-220ENST00000627371 FBN2P35556 2912 aa17.83■□□□□ 0.45
PTCD3-220ENST00000627371 FAM221AA4D161 298 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 CENPBD1B2RD01 187 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 NDUFB2O95178 105 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 IGHG1P01857 330 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 PGA4P0DJD7 388 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 PGA3P0DJD8 388 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 SH3BGRP55822 239 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-220ENST00000627371 TSPAN31Q12999 210 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 MICAQ29983 383 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 SSX8Q7RTT4 187 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 DUS3LQ96G46 650 aaKnown RBP17.83■□□□□ 0.44
PTCD3-220ENST00000627371 BOD1Q96IK1 185 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 GPX7Q96SL4 187 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-220ENST00000627371 POLDIP3Q9BY77 421 aaKnown RBP17.83■□□□□ 0.44
PTCD3-220ENST00000627371 ULBP2Q9BZM5 246 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 CRLF2Q9HC73 371 aa17.83■□□□□ 0.44
PTCD3-220ENST00000627371 ABCA12Q86UK0 2595 aa17.82■□□□□ 0.44
PTCD3-220ENST00000627371 GNGT2O14610 69 aa17.82■□□□□ 0.44
PTCD3-220ENST00000627371 TRMUO75648 421 aaKnown RBP17.82■□□□□ 0.44
PTCD3-220ENST00000627371 CD14P08571 375 aa17.82■□□□□ 0.44
PTCD3-220ENST00000627371 ACADSP16219 412 aa17.82■□□□□ 0.44
PTCD3-220ENST00000627371 RPL4P36578 427 aaKnown RBP17.82■□□□□ 0.44
PTCD3-220ENST00000627371 FXYD6P3P58550 94 aa17.82■□□□□ 0.44
PTCD3-220ENST00000627371 RPL27P61353 136 aaKnown RBP17.82■□□□□ 0.44
PTCD3-220ENST00000627371 RUNX1T1Q06455 604 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms