RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 RNF115Q9Y4L5 304 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 NBPF19A0A087WUL8 3843 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 A6NIZ1 184 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 ZNF99A8MXY4 864 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 J3KTA2 159 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 hCG_2039718K7EN88 272 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 CLOCKO15516 846 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 DNAJC8O75937 253 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 RAF1P04049 648 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 BIDP55957 195 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 RAP1BP61224 184 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 RAP1AP62834 184 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 BNIP1Q12981 228 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 NRN1LQ496H8 165 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 PAMR1Q6UXH9 720 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 ZNF627Q7L945 461 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 OR1K1Q8NGR3 316 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC7A13Q8TCU3 470 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 TMEM204Q9BSN7 226 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 YY1AP1Q9H869 796 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 CRLF2Q9HC73 371 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 MED29Q9NX70 200 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 RHCGQ9UBD6 479 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 ST6GALNAC2Q9UJ37 374 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 V9GYQ6 96 aa12.3□□□□□ -0.44
SNRPA1-216ENST00000626000 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 UPK3AO75631 287 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 SERPINI2O75830 405 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 IGHMP01871 453 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 HLA-DOBP13765 273 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 MSX2P35548 267 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 MAGEA2P43356 314 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 SPIBQ01892 262 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 KEAP1Q14145 624 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 TBRG1Q3YBR2 411 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 PODNL1Q6PEZ8 512 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 CYP2R1Q6VVX0 501 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 FAM86B1Q8N7N1 296 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 PIGTQ969N2 578 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 CCDC124Q96CT7 223 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 MBD6Q96DN6 1003 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 TXNIPQ9H3M7 391 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 PLEKHF2Q9H8W4 249 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 FAIMQ9NVQ4 179 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 FBN2P35556 2912 aa12.29□□□□□ -0.44
SNRPA1-216ENST00000626000 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 M0R3G1 203 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 AHCYL1O43865 530 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 PDE5AO76074 875 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 RAP2AP10114 183 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 ATP6V1B2P21281 511 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 AQP2P41181 271 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 ZNF84P51523 738 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 CLRN1P58418 232 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 CAMK2DQ13557 499 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 ZBED5Q49AG3 693 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 NOXO1Q8NFA2 376 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 ALG12Q9BV10 488 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 EMC6Q9BV81 110 aa12.28□□□□□ -0.44
SNRPA1-216ENST00000626000 TACC2O95359 2948 aa12.27□□□□□ -0.44
SNRPA1-216ENST00000626000 TCRBV5S2A0A599 114 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 SIAH2O43255 324 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 PIP5K1CO60331 668 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 NDUFB2O95178 105 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 F13BP05160 661 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 PGA4P0DJD7 388 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 PGA3P0DJD8 388 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 ACADSP16219 412 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 RRM2P31350 389 aa12.27□□□□□ -0.45
SNRPA1-216ENST00000626000 ARR3P36575 388 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms