RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF234Q14588 700 aa12.68□□□□□ -0.38
UBE3A-209ENST00000625778 KRT77Q7Z794 578 aa12.68□□□□□ -0.38
UBE3A-209ENST00000625778 LMAN2LQ9H0V9 348 aa12.68□□□□□ -0.38
UBE3A-209ENST00000625778 STARD5Q9NSY2 213 aa12.68□□□□□ -0.38
UBE3A-209ENST00000625778 PLXNA2O75051 1894 aa12.68□□□□□ -0.38
UBE3A-209ENST00000625778 MDC1Q14676 2089 aaKnown RBP12.68□□□□□ -0.38
UBE3A-209ENST00000625778 ELOA3DA6NLF2 546 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 TLX1P31314 330 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 SNRPEP62304 92 aaKnown RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 RUNX2Q13950 521 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ELOA3BQ3SY89 546 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DND1Q8IYX4 353 aaKnown RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ELOA3Q8NG57 546 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 CASTOR1Q8WTX7 329 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 A0A1B0GW55 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 CTNSO60931 367 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 F13BP05160 661 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 TYRP1P17643 537 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 UBXN2BQ14CS0 331 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 NUDT18Q6ZVK8 323 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 FAM219AQ8IW50 185 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 OR6N2Q8NGY6 317 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 IL5P05113 134 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 LAG3P18627 525 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DHODHQ02127 395 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DPTQ07507 201 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF77Q15935 545 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 GUCA2BQ16661 112 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 MIB2Q96AX9 1013 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF764Q96H86 408 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF350Q9GZX5 532 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 RXFP3Q9NSD7 469 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 DEC1Q9P2X7 70 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 SLC6A5Q9Y345 797 aa12.67□□□□□ -0.38
UBE3A-209ENST00000625778 FGF17O60258 216 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 MOSPD3O75425 235 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 AMY2AP04746 511 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 RAB40ALP0C0E4 278 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 CT62P0C5K7 136 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 MNDAP41218 407 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 ZNF227Q86WZ6 799 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 OR2L13Q8N349 312 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 RAB40AQ8WXH6 277 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 C3orf49Q96BT1 292 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 ALG12Q9BV10 488 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 TMPRSS13Q9BYE2 586 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 RSPH9Q9H1X1 276 aaPredicted RBP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 GSN-AS1Q9NRJ2 163 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 MIOXQ9UGB7 285 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 MRPS2Q9Y399 296 aaKnown RBP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 SLC31A1O15431 190 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 P2RX6O15547 441 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 LYPD3O95274 346 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 AGR2O95994 175 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 CEBPBP17676 345 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 PSMD4P55036 377 aaKnown RBP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 TDGQ13569 410 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 OR7A5Q15622 319 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 ARHGAP40Q5TG30 622 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 TMEM17Q86X19 198 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 SYS1Q8N2H4 156 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 PLPP7Q8NBV4 271 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 OR1S2Q8NGQ3 325 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 PAQR8Q8TEZ7 354 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 NSMAFQ92636 917 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 C10orf90Q96M02 699 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 APMAPQ9HDC9 416 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3A-209ENST00000625778 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
UBE3A-209ENST00000625778 OR2AT4A6NND4 320 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms