RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 WDFY2Q96P53 400 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.5
C3orf56-201ENST00000624688 CDC6Q99741 560 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 ANGPTL4Q9BY76 406 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 RNF32Q9H0A6 362 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 ACOXLQ9NUZ1 547 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 GNG8Q9UK08 70 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.5
C3orf56-201ENST00000624688 CMAHPQ9Y471 501 aa11.9□□□□□ -0.5
C3orf56-201ENST00000624688 H3BML4 177 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 RGS5O15539 181 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 NCR1O76036 304 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 TFPIP10646 304 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 TCEA1P23193 301 aaKnown RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PSMB10P40306 273 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PUDPQ08623 228 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CHAF1BQ13112 559 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 ATP1A4Q13733 1029 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MELKQ14680 651 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MFSD13AQ14CX5 517 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 H1FNTQ75WM6 255 aaPredicted RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PXKQ7Z7A4 578 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 NR2C2APQ86WQ0 139 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 RPS4Y2Q8TD47 263 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PAQR8Q8TEZ7 354 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SMIM19Q96E16 107 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SLC30A2Q9BRI3 323 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MROQ9BYG7 248 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 KCNN2Q9H2S1 579 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 WDR76Q9H967 626 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CHST11Q9NPF2 352 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 B9D1Q9UPM9 204 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 FKBP7Q9Y680 259 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 V9GYH0 126 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 FRYLO94915 3013 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CCDC187A0A096LP49 1063 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 A0A1W2PRG6 482 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SLC22A23A1A5C7 686 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PSMD9O00233 223 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 TBX1O43435 398 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 TRIM3O75382 744 aaPredicted RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 HPP00738 406 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CD1AP06126 327 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SHC1P29353 583 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MTNR1BP49286 362 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 GDI2P50395 445 aaKnown RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MYBPHQ13203 477 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 OXA1LQ15070 435 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CCDC58Q4VC31 144 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SPANXN2Q5MJ10 180 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 RPL22L1Q6P5R6 122 aaKnown RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 DHRS13Q6UX07 377 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 PLCZ1Q86YW0 608 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 DND1Q8IYX4 353 aaKnown RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 OR4K17Q8NGC6 315 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 MRPL48Q96GC5 212 aaKnown RBP11.89□□□□□ -0.51
C3orf56-201ENST00000624688 CEP19Q96LK0 163 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 ATF6BQ99941 703 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 ABCB9Q9NP78 766 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 ALKBH4Q9NXW9 302 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
C3orf56-201ENST00000624688 TERTO14746 1132 aaKnown RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ABHD16AO95870 558 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 CTLA4P16410 223 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 EDNRAP25101 427 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ETFDHQ16134 617 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ZNF181Q2M3W8 571 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ACSM3Q53FZ2 586 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 NHLRC1Q6VVB1 395 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 PLEKHG7Q6ZR37 379 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 CEACAM19Q7Z692 300 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 MS4A15Q8N5U1 240 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ASB10Q8WXI3 467 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 COX4I2Q96KJ9 171 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ADAD1Q96M93 576 aaKnown RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 UBL7Q96S82 380 aaPredicted RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 INTS14Q96SY0 518 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 TSPAN10Q9H1Z9 355 aaPredicted RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 PTGES2Q9H7Z7 377 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 FANCFQ9NPI8 374 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 ABCB10Q9NRK6 738 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 SERINC1Q9NRX5 453 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
C3orf56-201ENST00000624688 DAPK2Q9UIK4 370 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 UGT2A1Q9Y4X1 527 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
C3orf56-201ENST00000624688 GPR179Q6PRD1 2367 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms