RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 BARHL1Q9BZE3 327 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SPRY4Q9C004 299 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TPK1Q9H3S4 243 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 LAMP5Q9UJQ1 280 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 GNG8Q9UK08 70 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 NPIPA1Q9UND3 350 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 VDAC3Q9Y277 283 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 R4GN57 208 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TTC28Q96AY4 2481 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ZDBF2Q9HCK1 2354 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 MPDZO75970 2070 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TRAV1-2A0A0B4J238 106 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 LIPT2A6NK58 231 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ZNF879B4DU55 563 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 C11orf98E9PRG8 122 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SLC19A2O60779 497 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SERPINA7P05543 415 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 OCM2P0CE71 109 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 OCMP0CE72 109 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 ZNF17P17021 662 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 MAPK3P27361 379 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 TNFSF8P32971 234 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 DSCR4P56555 118 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 OR5M10Q6IEU7 315 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 H3F3CQ6NXT2 135 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 KCTD18Q6PI47 426 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 ARSKQ6UWY0 536 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 DCDC5Q6ZRR9 648 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 GLRX5Q86SX6 157 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 CDC20BQ86Y33 519 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 GTPBP8Q8N3Z3 284 aaPredicted RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 RPS4Y2Q8TD47 263 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 CT55Q8WUE5 264 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 PELI1Q96FA3 418 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 PGLYRP3Q96LB9 341 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ADAD1Q96M93 576 aaKnown RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 TTYH2Q9BSA4 534 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 CDCP1Q9H5V8 836 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SP140LQ9H930 580 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ZNF160Q9HCG1 818 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SRA1Q9HD15 236 aaKnown RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 SH2D2AQ9NP31 389 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 FAIMQ9NVQ4 179 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 DAPK2Q9UIK4 370 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ST6GALNAC2Q9UJ37 374 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TRBV2A0A0J9YWF9 115 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 LOC102725191A0A1B0GVB3 256 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 GJE1A6NN92 205 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 SNPHO15079 494 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 GDF9O60383 454 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 SELENOFO60613 162 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 GDI2P50395 445 aaKnown RBP14.73□□□□□ -0.05
LDB3-208ENST00000623007 MXD1Q05195 221 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 OR7A5Q15622 319 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 C1QL3Q5VWW1 255 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 IL20RBQ6UXL0 311 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 TMEM91Q6ZNR0 172 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 PPP1R32Q7Z5V6 425 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 OR6V1Q8N148 313 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 NLGN4YQ8NFZ3 816 aaPredicted RBP14.73□□□□□ -0.05
LDB3-208ENST00000623007 OR51L1Q8NGJ5 315 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 SETD6Q8TBK2 473 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 GHSRQ92847 366 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 PMEPA1Q969W9 287 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 NTNG2Q96CW9 530 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 RNF31Q96EP0 1072 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 C5orf34Q96MH7 638 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 KLHDC3Q9BQ90 382 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 MESP1Q9BRJ9 268 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 OR11A1Q9GZK7 315 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 SYT4Q9H2B2 425 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 RERGLQ9H628 205 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 PLEKHB1Q9UF11 243 aaPredicted RBP14.73□□□□□ -0.05
LDB3-208ENST00000623007 TEKT2Q9UIF3 430 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 B9D1Q9UPM9 204 aa14.73□□□□□ -0.05
LDB3-208ENST00000623007 CBR3O75828 277 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 CD82P27701 267 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 SLC35A1P78382 337 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 SLC3A1Q07837 685 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 RASGEF1BQ0VAM2 473 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 OXA1LQ15070 435 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 CSRP2Q16527 193 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 ZNF684Q5T5D7 378 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 HBMQ6B0K9 141 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 CENPSQ8N2Z9 138 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 GDPD1Q8N9F7 314 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 OR1J4Q8NGS1 313 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 MRI1Q9BV20 369 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 RABL2AQ9UBK7 228 aaPredicted RBP14.72□□□□□ -0.05
LDB3-208ENST00000623007 RABL2BQ9UNT1 228 aa14.72□□□□□ -0.05
LDB3-208ENST00000623007 SLC22A23A1A5C7 686 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 CD8B2A6NJW9 211 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 CTDSP2O14595 271 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 PDCD5O14737 125 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 PTTG1O95997 202 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 CD8BP10966 210 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ALOX5APP20292 161 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 EDNRAP25101 427 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 HSF1Q00613 529 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms