RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CEPT1Q9Y6K0 416 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 NPIPB13A6NJU9 1138 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 NPIPB4C9JG80 1138 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 XKRYO14609 159 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 TRAF3IP2O43734 574 aaPredicted RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 CYTIPO60759 359 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 WBP4O75554 376 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 FMO3P31513 532 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 PTGS2P35354 604 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 TDGF1P3P51864 188 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 BIDP55957 195 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 CRMP1Q14194 572 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 POU4F3Q15319 338 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 RBM48Q5RL73 367 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF362Q5T0B9 420 aaPredicted RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ARMC4Q5T2S8 1044 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 BCDIN3DQ7Z5W3 292 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 CPOQ8IVL8 374 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 FAM26EQ8N5C1 309 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC37A3Q8NCC5 494 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF519Q8TB69 540 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ABHD3Q8WU67 409 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ASB10Q8WXI3 467 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 NMNAT3Q96T66 252 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 SLX1AQ9BQ83 275 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 HINT3Q9NQE9 182 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 FAM183AA6NL82 134 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 TTLL8A6PVC2 850 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 PRR23D1E9PI22 279 aaPredicted RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 ARHGEF9O43307 516 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 PRR23D2P0DMB1 279 aaPredicted RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 PAICSP22234 425 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 ACVR2AP27037 513 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 GSTT1P30711 240 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 CDKN2AP42771 156 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 RASGEF1BQ0VAM2 473 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 ITGADQ13349 1161 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 C6orf141Q5SZD1 244 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 FAM205BPQ63HN1 556 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 PLBD1Q6P4A8 553 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 LEG1Q6P5S2 330 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 NHLRC1Q6VVB1 395 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 CREB3L2Q70SY1 520 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 CXXC5Q7LFL8 322 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 ZPLD1Q8TCW7 415 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 RNF128Q8TEB7 428 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 HDAC2Q92769 488 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 FN3KQ9H479 309 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 MED20Q9H944 212 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 COMMD3-BMI1R4GMX3 469 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 ZGRF1Q86YA3 2104 aa15.87■□□□□ 0.13
PTCHD3-202ENST00000622555 A6NIZ1 184 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC22A20A6NK97 555 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF716A6NP11 495 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 H7C1C5 153 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 ENTPD6O75354 484 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 AQP8O94778 261 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 CLDN17P56750 224 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 RAP1BP61224 184 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 LCN6P62502 163 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 RAP1AP62834 184 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 SMN1Q16637 294 aaKnown RBP15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 LAIR2Q6ISS4 152 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 ADCK1Q86TW2 530 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 ALDH16A1Q8IZ83 802 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 NPEPL1Q8NDH3 523 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 WBP1Q96G27 269 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 Q96MT0 163 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 EMC6Q9BV81 110 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF175Q9Y473 711 aa15.86■□□□□ 0.13
PTCHD3-202ENST00000622555 AHCYL1O43865 530 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 RENP00797 406 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 TEKQ02763 1124 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 OCLNQ16625 522 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 TMEM201Q5SNT2 666 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC25A30Q5SVS4 291 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 MEDAGQ5VYS4 303 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF585AQ6P3V2 769 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 HDDC2Q7Z4H3 204 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 MED12LQ86YW9 2145 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 MCEMP1Q8IX19 187 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 BBS1Q8NFJ9 593 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 BPIFB6Q8NFQ5 453 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 TMIGD2Q96BF3 282 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF775Q96BV0 537 aaPredicted RBP15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF582Q96NG8 517 aaPredicted RBP15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF385AQ96PM9 386 aaKnown RBP15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 TRIB1Q96RU8 372 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 H2AFY2Q9P0M6 372 aaPredicted RBP15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 KLHL9Q9P2J3 617 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 FLVCR1Q9Y5Y0 555 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 CACNA1BQ00975 2339 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC35F4A4IF30 521 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 OR6C68A6NDL8 312 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF726A6NNF4 738 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 AHRRA9YTQ3 701 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 TPOP07202 933 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 FCGR2AP12318 317 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 ABOP16442 354 aa15.85■□□□□ 0.13
PTCHD3-202ENST00000622555 CRHBPP24387 322 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms