RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 E7EWF7 191 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CYB561D2O14569 222 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 TOX3O15405 576 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CLOCKO15516 846 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 EMC8O43402 210 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 DENRO43583 198 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 TSPAN2O60636 221 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CLDN9O95484 217 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 KRT7P08729 469 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SLC35E2BP0CK96 405 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 ATP1B2P14415 290 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CALML3P27482 149 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CD82P27701 267 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 ACADSBP45954 432 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 NPY2RP49146 381 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 ACLYP53396 1101 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CEBPGP53567 150 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 UCNP55089 124 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 ATP5J2P56134 94 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 GLO1Q04760 184 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 RAD51Q06609 339 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SLC10A1Q14973 349 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 COQ5Q5HYK3 327 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 KHDRBS2Q5VWX1 349 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 STUMQ69YW2 141 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CWC27Q6UX04 472 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 HSDL2Q6YN16 418 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 PID1Q7Z2X4 250 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 HDDC2Q7Z4H3 204 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 DHDDSQ86SQ9 333 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CMTM8Q8IZV2 173 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CLDN19Q8N6F1 224 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 C8orf31Q8N9H6 132 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 MFSD9Q8NBP5 474 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 NECAP1Q8NC96 275 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 OR1F12Q8NHA8 337 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 WDR36Q8NI36 951 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 NANPQ8TBE9 248 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CRYGNQ8WXF5 182 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SMARCD2Q92925 531 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 MYLPFQ96A32 169 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 PELI1Q96FA3 418 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 DUS3LQ96G46 650 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 C9orf72Q96LT7 481 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 DPH7Q9BTV6 452 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 DUSP16Q9BY84 665 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SLC38A1Q9H2H9 487 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 LRRN3Q9H3W5 708 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 RNF41Q9H4P4 317 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SLC25A19Q9HC21 320 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 GDF3Q9NR23 364 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 POLE4Q9NR33 117 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 IMP3Q9NV31 184 aaKnown RBP2.94□□□□□ -1.94
BRCA1-229ENST00000621897 GNG12Q9UBI6 72 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CLN8Q9UBY8 286 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SEC14L4Q9UDX3 406 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 PRODH2Q9UF12 536 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SLC7A8Q9UHI5 535 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SCML1Q9UN30 329 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 POLDIP2Q9Y2S7 368 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 STARD10Q9Y365 291 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CCDC7Q96M83 1385 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 ANKRD30AQ9BXX3 1397 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 CDHR2Q9BYE9 1310 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 FGD5Q6ZNL6 1462 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 A0A1B0GTI1 187 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 A0A1B0GW15 77 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 WI2-2373I1.2A0A1W2PRP0 233 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 EPOPA6NHQ4 379 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LRRC30A6NM36 301 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 YJEFN3A6XGL0 299 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 EFCAB7A8K855 629 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 NPIPA7E9PJI5 369 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA6L19H0YKK7 550 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 MKRN2OSH3BPM6 223 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LIN7AO14910 233 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 GMDSO60547 372 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CIAO1O76071 339 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 STK17BO94768 372 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 VAPBO95292 243 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 BRI3O95415 125 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 IGHV3-9P01782 118 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 RPN2P04844 631 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 IL6P05231 212 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 ANXA5P08758 320 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 NPIPA8P0DM63 369 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SMIM10L1P0DMW3 83 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LAMP1P11279 417 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CYP11B1P15538 503 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CD1EP15812 388 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 GTF2E2P29084 291 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 PCK1P35558 622 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CSNK1DP48730 415 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 PSMD7P51665 324 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 OR2B6P58173 313 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 MAGOHP61326 146 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 S100A12P80511 92 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CHRNB3Q05901 458 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms