RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR6N1Q8NGY5 312 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 NEIL3Q8TAT5 605 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 ALKBH3Q96Q83 286 aaPredicted RBP9.48□□□□□ -0.89
VPS11-208ENST00000621676 PRRG3Q9BZD7 231 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SLC6A15Q9H2J7 730 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SDHAF3Q9NRP4 125 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 PLCE1Q9P212 2302 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 OR2M5A3KFT3 312 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 OR6C70A6NIJ9 312 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 SNTNA6NMZ2 147 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FAM25AB3EWG3 89 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FAM25CB3EWG5 89 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FAM25GB3EWG6 89 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CBFA2T3O75081 653 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CD14P08571 375 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CALCBP10092 127 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 PSKH1P11801 424 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 IMPDH2P12268 514 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 MAGEA5P43359 124 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 ARG2P78540 354 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FHL1Q13642 323 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 KLHL22Q53GT1 634 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FAM69AQ5T7M9 428 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 TRILQ7L0X0 811 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 LUZP2Q86TE4 346 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 NANOGP1Q8N7R0 232 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CLEC1AQ8NC01 280 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 ZNF385AQ96PM9 386 aaKnown RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 CCNL2Q96S94 520 aaPredicted RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 LDAHQ9H6V9 325 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 C12orf49Q9H741 205 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 B3GAT2Q9NPZ5 323 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 TUBA8Q9NY65 449 aaPredicted RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 ZNF229Q9UJW7 825 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 A0A096LPE4 126 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 A0A1W2PPZ6 126 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 MPZL2O60487 215 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CCL2P13500 99 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 PNLIPP16233 465 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 CD97P48960 835 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 TMED10P49755 219 aaKnown RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 MAMDC2Q7Z304 686 aaPredicted RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 NUP54Q7Z3B4 507 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 LSMEM1Q8N8F7 131 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 UFD1Q92890 307 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 ZFP3Q96NJ6 502 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 MICU1Q9BPX6 476 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 YTHDF1Q9BYJ9 559 aaKnown RBP9.47□□□□□ -0.89
VPS11-208ENST00000621676 PRRG4Q9BZD6 226 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 LAT2Q9GZY6 243 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 FBXO8Q9NRD0 319 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 INIPQ9NRY2 104 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 NOTCH2Q04721 2471 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 GTF3C1Q12789 2109 aa9.47□□□□□ -0.89
VPS11-208ENST00000621676 TRABD2BA6NFA1 517 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 STMND1H3BQB6 276 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 TP53I11O14683 189 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 TOX3O15405 576 aaPredicted RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 KLF4O43474 513 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 GALNSP34059 522 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 DIO1P49895 249 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 POLR2HP52434 150 aaKnown RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 TUBA1BP68363 451 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 TBCEQ15813 527 aaPredicted RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 HES5Q5TA89 166 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 NXNL2Q5VZ03 156 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 TUBA1AQ71U36 451 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 GRINAQ7Z429 371 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 ABHD3Q8WU67 409 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 ZFAND2BQ8WV99 257 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 HOXD1Q9GZZ0 328 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 ZMAT3Q9HA38 289 aaKnown RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 TXNL4BQ9NX01 149 aaKnown RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 CHCHD2Q9Y6H1 151 aaPredicted RBP9.46□□□□□ -0.89
VPS11-208ENST00000621676 TACC2O95359 2948 aa9.46□□□□□ -0.89
VPS11-208ENST00000621676 LRBAP50851 2863 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 A8MVM7 634 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 F5H5K5 113 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 YKT6O15498 198 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 SSX4O60224 188 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 BMP4P12644 408 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 ZNF43P17038 809 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 S100A5P33763 92 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 EIF2S3P41091 472 aaKnown RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 SLC6A9P48067 706 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 GABARAPL2P60520 117 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 SNRPGP62308 76 aaKnown RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 PUDPQ08623 228 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 DGUOKQ16854 277 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 DCAF10Q5QP82 559 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 NDUFAF7Q7L592 441 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 NAA40Q86UY6 237 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 SLC35F2Q8IXU6 374 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 NCOA6Q14686 2063 aaPredicted RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 USF3Q68DE3 2245 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 CCDC187A0A096LP49 1063 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms