RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 REV1Q9UBZ9 1251 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 ICAM5Q9UMF0 924 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 TMEM5Q9Y2B1 443 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 MED31Q9Y3C7 131 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 HEATR5AQ86XA9 2040 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.28□□□□□ -0.12
CD40-207ENST00000620709 PIP5K1CO60331 668 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 INHBBP09529 407 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 PPP3CBP16298 524 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 PGCP20142 388 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 FPR3P25089 353 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 ELK4P28324 431 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 GGT2P36268 569 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 GSSP48637 474 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 IDH2P48735 452 aaKnown RBP14.28□□□□□ -0.12
CD40-207ENST00000620709 IL5RAQ01344 420 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 CBFBQ13951 182 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 TSC22D1Q15714 1073 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 BEX5Q5H9J7 111 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 BIVMQ86UB2 503 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 TUSC5Q8IXB3 177 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 ZNF786Q8N393 782 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 OR5W2Q8NH69 310 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 ZNF563Q8TA94 476 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 GPR119Q8TDV5 335 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 CPNE4Q96A23 557 aaPredicted RBP14.28□□□□□ -0.12
CD40-207ENST00000620709 C3orf49Q96BT1 292 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 FAM46AQ96IP4 442 aaKnown RBP14.28□□□□□ -0.12
CD40-207ENST00000620709 ZNF426Q9BUY5 554 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 ZNF696Q9H7X3 374 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 SCOCQ9UIL1 159 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
CD40-207ENST00000620709 ARID1AO14497 2285 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 A0A1W2PNR3 127 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 H3BN98 237 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 SMAD7O15105 426 aaKnown RBP14.27□□□□□ -0.12
CD40-207ENST00000620709 PNMTP11086 282 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 PRKCAP17252 672 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 ADH6P28332 368 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.12
CD40-207ENST00000620709 PRKCDQ05655 676 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.12
CD40-207ENST00000620709 QPRTQ15274 297 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 CLEC9AQ6UXN8 241 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 LINC00114Q6XXX2 140 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 C20orf204Q6ZNR8 217 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 RASSF6Q6ZTQ3 369 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 FCRLAQ7L513 359 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 NUFIP2Q7Z417 695 aaKnown RBP14.27□□□□□ -0.12
CD40-207ENST00000620709 CDK20Q8IZL9 346 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 PLPPR2Q96GM1 343 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 Q96MF0 132 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 GPA33Q99795 319 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 YTHDF1Q9BYJ9 559 aaKnown RBP14.27□□□□□ -0.12
CD40-207ENST00000620709 DSCAMO60469 2012 aa14.27□□□□□ -0.12
CD40-207ENST00000620709 NAV3Q8IVL0 2385 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 A0A087WUJ7 227 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 ZAR1LA6NP61 321 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 KLF4O43474 513 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 SOX14O95416 240 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 PLAUP00749 431 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 IFI30P13284 250 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 HOXB4P17483 251 aaPredicted RBP14.26□□□□□ -0.13
CD40-207ENST00000620709 POU1F1P28069 291 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 LOXP28300 417 aaPredicted RBP14.26□□□□□ -0.13
CD40-207ENST00000620709 SLC1A3P43003 542 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 GPR4P46093 362 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 ISL1P61371 349 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 LTBQ06643 244 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 CD47Q08722 323 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 RNPS1Q15287 305 aaKnown RBP14.26□□□□□ -0.13
CD40-207ENST00000620709 ZNF704Q6ZNC4 412 aaPredicted RBP14.26□□□□□ -0.13
CD40-207ENST00000620709 DEPDC4Q8N2C3 294 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 PFN4Q8NHR9 129 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 RNF128Q8TEB7 428 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 C12orf10Q9HB07 376 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 GPR52Q9Y2T5 361 aa14.26□□□□□ -0.13
CD40-207ENST00000620709 ELOA3DA6NLF2 546 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 KPNA4O00629 521 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 TP53P04637 393 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 PTNP21246 168 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ENPP1P22413 925 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 IL32P24001 234 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 CDC42P60953 191 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 SELENBP1Q13228 472 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ELOA3BQ3SY89 546 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 KCTD21Q4G0X4 260 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 TMEM154Q6P9G4 183 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ATG4DQ86TL0 474 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 MEX3DQ86XN8 651 aaKnown RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 LRRC75A-AS1Q8N1F1 130 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 STEAP2Q8NFT2 490 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ELOA3Q8NG57 546 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 FAM81AQ8TBF8 368 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 TEX47Q8TBZ9 253 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 FBLIM1Q8WUP2 373 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ZNF775Q96BV0 537 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms