RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 NPEPL1Q8NDH3 523 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ATP6V1C2Q8NEY4 427 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 OR4S1Q8NGB4 309 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZNF563Q8TA94 476 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 B9D2Q9BPU9 175 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 PTDSS2Q9BVG9 487 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 LPAR2Q9HBW0 351 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SLC6A13Q9NSD5 602 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ASH2LQ9UBL3 628 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 POLR3HQ9Y535 204 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 KIR2DS1A0A191URI9 304 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 A0A1W2PPW3 197 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 G3V4G9 280 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 RNASEK-C17orf49H0YIS7 233 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 J3QW42 95 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ST8SIA5O15466 376 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 IGHV1-46P01743 117 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 DBIP07108 87 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 CHRM4P08173 479 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 FGF4P08620 206 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 CDH2P19022 906 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 ARL1P40616 181 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 MDH2P40926 338 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 ANXA11P50995 505 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 SEC24CP53992 1094 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 FUT5Q11128 374 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 AANATQ16613 207 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 PDCD4Q53EL6 469 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 XKR7Q5GH72 579 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 C1orf140Q5VVS0 124 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 KRT80Q6KB66 452 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 METAP1DQ6UB28 335 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZDHHC24Q6UX98 284 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZYG11AQ6WRX3 759 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 USP51Q70EK9 711 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZNF584Q8IVC4 421 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 TMEM99Q8N816 258 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 CEP112Q8N8E3 955 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SLC38A4Q969I6 547 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 NEURL3Q96EH8 262 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SLC35G5Q96KT7 338 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ALKBH3Q96Q83 286 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 NAPGQ99747 312 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 GAL3ST1Q99999 423 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SYT3Q9BQG1 590 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 RAB17Q9H0T7 212 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 DECR2Q9NUI1 292 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 MIOXQ9UGB7 285 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZDHHC2Q9UIJ5 367 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 KCNE3Q9Y6H6 103 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 GMNCA6NCL1 334 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 TMEM114B3SHH9 223 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 C9JVG2 144 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 RAD51CO43502 376 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 LIPFP07098 398 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 ABHD2P08910 425 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 WNT2P09544 360 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 NAT2P11245 290 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 MATN1P21941 496 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 TACR3P29371 465 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 CD80P33681 288 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 KCNJ10P78508 379 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 LCN2P80188 198 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 EGFEM1PQ0D2K5 195 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 CEACAM7Q14002 265 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 NKPD1Q17RQ9 610 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 LIN52Q52LA3 116 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 MROH9Q5TGP6 573 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 FIP1L1Q6UN15 594 aaKnown RBP3.84□□□□□ -1.8
SNCA-213ENST00000618500 LRP11Q86VZ4 500 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 ZCCHC24Q8N2G6 241 aaKnown RBP3.84□□□□□ -1.8
SNCA-213ENST00000618500 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 WIPF2Q8TF74 440 aaPredicted RBP3.84□□□□□ -1.8
SNCA-213ENST00000618500 IPCEF1Q8WWN9 437 aaPredicted RBP3.84□□□□□ -1.8
SNCA-213ENST00000618500 RAB40AQ8WXH6 277 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 C11orf40Q8WZ69 217 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 ROPN1LQ96C74 230 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 SAMD8Q96LT4 415 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 PPP3R2Q96LZ3 170 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 SIGLEC11Q96RL6 698 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 C1QTNF5Q9BXJ0 243 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 OR11A1Q9GZK7 315 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 VPS11Q9H270 941 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 LRMDAQ9H2I8 198 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 KLHL14Q9P2G3 628 aa3.84□□□□□ -1.8
SNCA-213ENST00000618500 PRAMEF27A3QJZ7 478 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 CFAP73A6NFT4 308 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 NR5A2O00482 541 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 OR2T1O43869 369 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 GPR137BO60478 399 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 SUPT7LO94864 414 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 TGDSO95455 350 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 DUS4LO95620 317 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 LHBP01229 141 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 BMP2P12643 396 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PRPS1L1P21108 318 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 KITLGP21583 273 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 SERPINB5P36952 375 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 IER3P46695 156 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms