RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PRKACBP22694 351 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 GABRA5P31644 462 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CCL11P51671 97 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CARD18P57730 90 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 HERV-K104P61576 105 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SQSTM1Q13501 440 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 UNQ6126/PRO20091Q6UXV3 157 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 KDM8Q8N371 416 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 TMEM178AQ8NBL3 297 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 GPR32P1Q8NGA4 272 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 SLC19A3Q9BZV2 496 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SLC43A1O75387 559 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 NR4A2P43354 598 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 FAM199XQ6PEV8 388 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 KIRREL2Q6UWL6 708 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 AP1S3Q96PC3 154 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SLC25A18Q9H1K4 315 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 RABL2AQ9UBK7 228 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 NUFIP1Q9UHK0 495 aaKnown RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 CLEC2DQ9UHP7 191 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 RABL2BQ9UNT1 228 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 GABRPO00591 440 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SEC14L2O76054 403 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CD79AP11912 226 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 MAKP20794 623 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 POU3F4P49335 361 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SIRPAP78324 504 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 AAED1Q7RTV5 226 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ST8SIA1Q92185 356 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 CMC2Q9NRP2 79 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 PLCXD1Q9NUJ7 323 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 DCDC2BA2VCK2 349 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 IL1AP01583 271 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 LINC00271P0C7V0 271 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 PCBP3P57721 371 aaKnown RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 NIPAL3Q6P499 406 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 FIP1L1Q6UN15 594 aaKnown RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 DCDC5Q6ZRR9 648 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 BRIX1Q8TDN6 353 aaKnown RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 TTC9Q92623 222 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 TEAD3Q99594 435 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 WDR76Q9H967 626 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 GGT3PA6NGU5 568 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 AKR7A3O95154 331 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 CT62P0C5K7 136 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 GPR85P60893 370 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 NKAPLQ5M9Q1 402 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 DHRS13Q6UX07 377 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 OR4C3Q8NH37 302 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 CACNA1CQ13936 2221 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 ENPP1P22413 925 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 ADH6P28332 368 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 LSSP48449 732 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 FOXK1P85037 733 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 ABHD12BQ7Z5M8 362 aaPredicted RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 OR5T2Q8NGG2 359 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 OR11A1Q9GZK7 315 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 SLA2Q9H6Q3 261 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 MEPEQ9NQ76 525 aaPredicted RBP12.69□□□□□ -0.38
CIITA-213ENST00000618327 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 ZNF281Q9Y2X9 895 aa12.69□□□□□ -0.38
CIITA-213ENST00000618327 DPM1O60762 260 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 GLCEO94923 617 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 PIPP12273 146 aaPredicted RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 TEKQ02763 1124 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 FGL1Q08830 312 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 OVCH1Q7RTY7 1134 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 COMMD7Q86VX2 200 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 LMF1Q96S06 567 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 TMEFF2Q9UIK5 374 aaPredicted RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 ADAM18Q9Y3Q7 739 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 A0A1W2PS29 197 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 TGFBR3Q03167 851 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 SFRP4Q6FHJ7 346 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms