RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 MED29Q9NX70 200 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 KLHL13Q9P2N7 655 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 OR6C68A6NDL8 312 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 XPNPEP2O43895 674 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 LYNP07948 512 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF43P17038 809 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ACVR1BP36896 505 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 PON3Q15166 354 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 KCTD21Q4G0X4 260 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 KRTCAP3Q53RY4 240 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 NIPAL3Q6P499 406 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ZIC4Q8N9L1 334 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 TEX19Q8NA77 164 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ROBO4Q8WZ75 1007 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 Q96MT0 163 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 KCNK17Q96T54 332 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 MED20Q9H944 212 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 CLN6Q9NWW5 311 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 CAMK2AQ9UQM7 478 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 MYRFQ9Y2G1 1151 aa13.51□□□□□ -0.25
CBWD1-225ENST00000616944 IGKV3D-15A0A087WSY6 115 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PRR23D1E9PI22 279 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 ZNHIT1O43257 154 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PRODHO43272 600 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 BCL10O95999 233 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PRR23D2P0DMB1 279 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SLC15A1P46059 708 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 NUDT6P53370 316 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 DBPQ10586 325 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 KLRB1Q12918 225 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 LEG1Q6P5S2 330 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 JAZF1Q86VZ6 243 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PM20D2Q8IYS1 436 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 GHDCQ8N2G8 530 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 FNDC9Q8TBE3 224 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 ABHD3Q8WU67 409 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SNRNP40Q96DI7 357 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 MRPL13Q9BYD1 178 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 FKBP14Q9NWM8 211 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PAK1IP1Q9NWT1 392 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 VSX1Q9NZR4 365 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CLCF1Q9UBD9 225 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF175Q9Y473 711 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 FLVCR1Q9Y5Y0 555 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PHF3Q92576 2039 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 INTS1Q8N201 2190 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PRSS37A4D1T9 235 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 A6NIZ1 184 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CLCA1A8K7I4 914 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 NPIPA2E9PIF3 369 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 NPIPA3F8WFD2 350 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 H7C1C5 153 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SMNDC1O75940 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 AQP8O94778 261 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CLUP10909 449 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SFTPCP11686 197 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 BIDP55957 195 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 RAP1BP61224 184 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 LCN6P62502 163 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 RAP1AP62834 184 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CSNK2BP67870 215 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SLC35A2P78381 396 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 PLXDC2Q6UX71 529 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 BPIFB6Q8NFQ5 453 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 OR6X1Q8NH79 312 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 KISS1RQ969F8 398 aaPredicted RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
CBWD1-225ENST00000616944 SIGLEC11Q96RL6 698 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 DUSP21Q9H596 190 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 AMBNQ9NP70 447 aa13.5□□□□□ -0.25
CBWD1-225ENST00000616944 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 DCTN6O00399 190 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 XKRYO14609 159 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 ARHGEF9O43307 516 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF432O94892 652 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SYNGR4O95473 234 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 PGA4P0DJD7 388 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 PGA3P0DJD8 388 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
CBWD1-225ENST00000616944 ACVR2AP27037 513 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 NTF4P34130 210 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 SLC25A1P53007 311 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 CDH11P55287 796 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 GABARAPL2P60520 117 aa13.49□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms