RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
UBXN1-218ENST00000616865 GASTP01350 101 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 GSTM3P21266 225 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 PRKACGP22612 351 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 AHCYP23526 432 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 PCSK6P29122 969 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 C1DQ13901 141 aaKnown RBP13.16□□□□□ -0.3
UBXN1-218ENST00000616865 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 GPAT4Q86UL3 456 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 HS3ST5Q8IZT8 346 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 CNEP1R1Q8N9A8 125 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 OR13C2Q8NGS9 318 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 OR51A7Q8NH64 312 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 EME1Q96AY2 570 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 PERPQ96FX8 193 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 MDFIQ99750 246 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 CIB1Q99828 191 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 MED18Q9BUE0 208 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 KLHL13Q9P2N7 655 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
UBXN1-218ENST00000616865 RASD1Q9Y272 281 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 B3GALT5Q9Y2C3 310 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
UBXN1-218ENST00000616865 TRAV27A0A087WT01 109 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 TRIM64A6NGJ6 449 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 TRIM64BA6NI03 449 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 AQP7P3A6NL99 342 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 C11orf98E9PRG8 122 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 SMAD9O15198 467 aaKnown RBP13.15□□□□□ -0.3
UBXN1-218ENST00000616865 RNF13O43567 381 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 VAMP5O95183 116 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 ADAP00813 363 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 FPR3P25089 353 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 UGT2B10P36537 528 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 PUDPQ08623 228 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 RNPS1Q15287 305 aaKnown RBP13.15□□□□□ -0.3
UBXN1-218ENST00000616865 TRIP10Q15642 601 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 ZBED5Q49AG3 693 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.3
UBXN1-218ENST00000616865 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 PSD2Q9BQI7 771 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 DGCR6LQ9BY27 220 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 OPN3Q9H1Y3 402 aaPredicted RBP13.15□□□□□ -0.3
UBXN1-218ENST00000616865 RNPEPL1Q9HAU8 725 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 KLHL9Q9P2J3 617 aa13.15□□□□□ -0.3
UBXN1-218ENST00000616865 MAGED1Q9Y5V3 778 aaPredicted RBP13.15□□□□□ -0.3
UBXN1-218ENST00000616865 PDLIM1O00151 329 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 PLPP3O14495 311 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 MGRN1O60291 552 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 CYTIPO60759 359 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 SERPINI2O75830 405 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 AQP8O94778 261 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 ASAH2BP0C7U1 165 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 RPL4P36578 427 aaKnown RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 AQP2P41181 271 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 GSSP48637 474 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 PRPS1P60891 318 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 SIRPAP78324 504 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 SLC34A1Q06495 639 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 COX10Q12887 443 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 ZBTB49Q6ZSB9 765 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 BTLAQ7Z6A9 289 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 UEVLDQ8IX04 471 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 LIPHQ8WWY8 451 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 TNFRSF13CQ96RJ3 184 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 TACO1Q9BSH4 297 aaKnown RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
UBXN1-218ENST00000616865 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 GABARAPL1Q9H0R8 117 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 ELOVL5Q9NYP7 299 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 SEC14L4Q9UDX3 406 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 POFUT2Q9Y2G5 429 aa13.14□□□□□ -0.31
UBXN1-218ENST00000616865 DSCAMO60469 2012 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 ARID1AO14497 2285 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 A0A1W2PRG6 482 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 INAFM1C9JVW0 142 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 H3BN98 237 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 GPR171O14626 319 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 NDUFB2O95178 105 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 ATP6V1G2O95670 118 aa13.13□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF43P17038 809 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms