RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FBXO45P0C2W1 286 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CNR1P21554 472 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 GABREP78334 506 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SSBP1Q04837 148 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 SQSTM1Q13501 440 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SAXO2Q658L1 398 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CNEP1R1Q8N9A8 125 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PLPP5Q8NEB5 264 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 GAB3Q8WWW8 586 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 INSM2Q96T92 566 aaPredicted RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 TMED7-TICAM2A0A0A6YYA0 188 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 FADS1O60427 444 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 DFFBO76075 338 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 HLA-DOBP13765 273 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CPEP16870 476 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PSMB5P28074 263 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 RPL35P42766 123 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 CLDN17P56750 224 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SORDQ00796 357 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CHRNEQ04844 493 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 TBC1D28Q2M2D7 210 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ZNF628Q5EBL2 1059 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CST9LP1Q5W188 147 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SLC48A1Q6P1K1 146 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SLC51BQ86UW2 128 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 MEX3DQ86XN8 651 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 DND1Q8IYX4 353 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 LSMEM2Q8N112 164 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 AGBL5Q8NDL9 886 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 OLIG1Q8TAK6 271 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 GHSRQ92847 366 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 CPNE4Q96A23 557 aaPredicted RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 TM4SF18Q96CE8 201 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 GALNT9Q9HCQ5 603 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PRSS16Q9NQE7 514 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 LRIT1Q9P2V4 623 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 TMED7Q9Y3B3 224 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 QSER1Q2KHR3 1735 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 ADAM10O14672 748 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 PIP5K1CO60331 668 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A6P0DMU7 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A5P0DMU8 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A7P0DMV0 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A8P0DMV1 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A9P0DMV2 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 PRKACAP17612 351 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SLC9A3R2Q15599 337 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A2Q5DJT8 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A1Q5HYN5 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NHSL2Q5HYW2 709 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 DHRS4L2Q6PKH6 230 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 KANSL1Q7Z3B3 1105 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 DMBX1Q8NFW5 382 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CT45A3Q8NHU0 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 RHBDD1Q8TEB9 315 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 ZNF416Q9BWM5 594 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 CACFD1Q9UGQ2 172 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 EIF4E2O60573 245 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 TUSC2O75896 110 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 ENPP1P22413 925 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 DDOSTP39656 456 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 TMEM176BQ3YBM2 270 aaPredicted RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 COX15Q7KZN9 410 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NAXDQ8IW45 347 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 PRSS35Q8N3Z0 413 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 DNAJC5GQ8N7S2 189 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 OR2A12Q8NGT7 310 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 KIRREL1Q96J84 757 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 HHIPL1Q96JK4 782 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NIPSNAP3BQ9BS92 247 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 DYNLRB1Q9NP97 96 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NDUFB11Q9NX14 153 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 HAO2Q9NYQ3 351 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 TRAPPC2LQ9UL33 140 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NOSIPQ9Y314 301 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 AGPAT2O15120 278 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 TAPBPO15533 448 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 FOLR1P15328 257 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SEC61A1P61619 476 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 ASAH1Q13510 395 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 PAPD4Q6PIY7 484 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 DPPA2Q7Z7J5 298 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 C3orf58Q8NDZ4 430 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 BBS1Q8NFJ9 593 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 BOD1Q96IK1 185 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 RNF170Q96K19 258 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 C19orf43Q9BQ61 176 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 TPSD1Q9BZJ3 242 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SELENOIQ9C0D9 397 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 OR11A1Q9GZK7 315 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 NXF5Q9H1B4 397 aaKnown RBP4.22□□□□□ -1.73
CHD9-221ENST00000615216 UBR3Q6ZT12 1888 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 TMEM72A0PK05 275 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 K7EQM0 130 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 HCRTR1O43613 425 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SOD1P00441 154 aa4.22□□□□□ -1.73
CHD9-221ENST00000615216 SNRNP70P08621 437 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms