RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ZNF195O14628 629 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 EPHB3P54753 998 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NUTF2P61970 127 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MRM1Q6IN84 353 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MOB3CQ70IA8 216 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MEPCEQ7L2J0 689 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FCRLAQ7L513 359 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 BEND2Q8NDZ0 799 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GPR148Q8TDV2 347 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ACY3Q96HD9 319 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MSLNLQ96KJ4 702 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR10C1Q96KK4 312 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF583Q96ND8 569 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SYT11Q9BT88 431 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PISDQ9UG56 409 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CSAG2Q9Y5P2 127 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GLI3P10071 1580 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 A0A0B4J293 547 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NPIPB9F8W1W9 429 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TK1P04183 234 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CLDN6P56747 220 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 STARD6P59095 220 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GAGE1Q13065 139 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SH2D5Q6ZV89 423 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SERPINA9Q86WD7 417 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR4K5Q8NGD3 323 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ORAI1Q96D31 301 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PDCD2LQ9BRP1 358 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NTPCRQ9BSD7 190 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM231Q9H6L2 316 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 IL21RQ9HBE5 538 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PCDH8O95206 1070 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FOLR2P14207 255 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TLE1Q04724 770 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 AMHR2Q16671 573 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SOWAHCQ53LP3 525 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NCMAPQ5T1S8 102 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PLPPR4Q7Z2D5 763 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GCNT2Q8N0V5 402 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF516Q92618 1163 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 HCAR1Q9BXC0 346 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FBXL12Q9NXK8 326 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TRAPPC1Q9Y5R8 145 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 EP300Q09472 2414 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FGF9P31371 208 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CAV3P56539 151 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 KRTDAPP60985 99 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MZB1Q8WU39 189 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 RHCGQ9UBD6 479 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OPN1SWP03999 348 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 VEGFAP15692 232 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 AK4P27144 223 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TACR3P29371 465 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 HTR1FP30939 366 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 EVX2Q03828 476 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SYT13Q7L8C5 426 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ISCA2Q86U28 154 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NAGKQ9UJ70 344 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 UBE2CO00762 179 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NUDT14O95848 222 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF823P16415 610 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PNRC1Q12796 327 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ST3GAL2Q16842 350 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FAHD1Q6P587 224 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CLEC2AQ6UVW9 174 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CNTN4Q8IWV2 1026 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ASB17Q8WXJ9 295 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PLK3Q9H4B4 646 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MMP24Q9Y5R2 645 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF27A3QJZ7 478 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF25A6NGN4 478 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 TISP43B9A030 160 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF4O60810 478 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 CST4P01036 141 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 SLC6A8P48029 635 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 DSC2Q02487 901 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF9Q5VWM5 478 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF534Q76KX8 674 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 GPC2Q8N158 579 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 PELI3Q8N2H9 469 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 SIDT2Q8NBJ9 832 aaKnown RBP4.59□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM37Q8WXS4 190 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 C12orf42Q96LP6 360 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 ATG10Q9H0Y0 220 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 RCC2Q9P258 522 aaKnown RBP4.59□□□□□ -1.67
VPS13D-213ENST00000613099 MYLKQ15746 1914 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 SURF2Q15527 256 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-213ENST00000613099 CLEC14AQ86T13 490 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 HMGB4Q8WW32 186 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF75AQ96N20 296 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 SLC46A2Q9BY10 475 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 MRPL37Q9BZE1 423 aaKnown RBP4.59□□□□□ -1.67
VPS13D-213ENST00000613099 PIGVQ9NUD9 493 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 GAGE10A6NGK3 116 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 A8MVM7 634 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 CLDN34H7C241 214 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 ITGB5P18084 799 aa4.59□□□□□ -1.67
VPS13D-213ENST00000613099 CHRNB4P30926 498 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms