RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GTF2A1LQ9UNN4 478 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF281Q9Y2X9 895 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 HRH3Q9Y5N1 445 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 PI4KAP42356 2102 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 GMDSO60547 372 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TIAF1O95411 115 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 HLA-DQA2P01906 255 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 HLA-DOBP13765 273 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 FAPQ12884 760 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 HLA-DQA1Q5Y7H0 255 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 BICRALQ6AI39 1079 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 SIX5Q8N196 739 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TEX19Q8NA77 164 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TBL1XR1Q9BZK7 514 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC22A11Q9NSA0 550 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLCO1C1Q9NYB5 712 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 KLK11Q9UBX7 282 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 FAM172BPA6NC97 362 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 MPZL1O95297 269 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 GIMD1P0DJR0 217 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 BTBD16Q32M84 506 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 OGFOD3Q6PK18 319 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 UNQ9370/PRO34162Q6UXP9 181 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 HAVCR2Q8TDQ0 301 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 FGF21Q9NSA1 209 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TEKT2Q9UIF3 430 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 LAMP5Q9UJQ1 280 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 KIF26BQ2KJY2 2108 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 IFITM5A6NNB3 132 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 ABHD16AO95870 558 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 OPN1LWP04000 364 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 TCRBP04435 133 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 ELAVL1Q15717 326 aaKnown RBP12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 LAMTOR1Q6IAA8 161 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF440Q8IYI8 595 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR52I2Q8NH67 350 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 CREB3L1Q96BA8 519 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC19A3Q9BZV2 496 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 ADAM19Q9H013 955 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 CACNA1EQ15878 2313 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 BLACEA4D250 179 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 GDF9O60383 454 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 TSPAN2O60636 221 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 TSC22D2O75157 780 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 UBL3O95164 117 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 BGLAPP02818 100 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 GDNFP39905 211 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SMAD4Q13485 552 aaKnown RBP12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 CLPPQ16740 277 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 CDC20BQ86Y33 519 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR5AK2Q8NH90 309 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 PTDSS2Q9BVG9 487 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 CACNG6Q9BXT2 260 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 EVA1AQ9H8M9 152 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR5V1Q9UGF6 321 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF222Q9UK12 451 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC22A13Q9Y226 551 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 RCE1Q9Y256 329 aa12.74□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRABD2BA6NFA1 517 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 FABP7O15540 132 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 S100A1P23297 94 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 DPP4P27487 766 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ADH7P40394 386 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 GZMKP49863 264 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ACKR1Q16570 336 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 STAC2Q6ZMT1 411 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 OVCH1Q7RTY7 1134 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 SEMA4CQ9C0C4 833 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 LAT2Q9GZY6 243 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 SUSD5O60279 629 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 FBXW4P57775 412 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ALKBH1Q13686 389 aaKnown RBP12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 LYPD8Q6UX82 237 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 TMPRSS12Q86WS5 348 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 GRPEL2Q8TAA5 225 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 SYNPRQ8TBG9 265 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 NSMAFQ92636 917 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZCCHC4Q9H5U6 513 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms