RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 S1PR1P21453 382 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MAP2K6P52564 334 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MEP1BQ16820 701 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 CT45A2Q5DJT8 189 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 TMEM65Q6PI78 240 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 TMEM92Q6UXU6 159 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 PM20D2Q8IYS1 436 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 POMGNT2Q8NAT1 580 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 LYRM4Q9HD34 91 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 HAO2Q9NYQ3 351 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 KCNG2Q9UJ96 466 aa12.8□□□□□ -0.36
COL6A1-207ENST00000612273 FRYLO94915 3013 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 GABARAPH6UMI1 98 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF35P13682 527 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 TPMTP51580 245 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 C3P1Q6ZMU1 363 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF550Q7Z398 422 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 SYS1Q8N2H4 156 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 OR51S1Q8NGJ8 323 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 LINC00052Q96N35 136 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ATXN7L1Q9ULK2 861 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 BAIAP2Q9UQB8 552 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 A0A087WUJ7 227 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 GPR143P51810 404 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ETFDHQ16134 617 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DMRTC1Q5HYR2 192 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF627Q7L945 461 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 OR6V1Q8N148 313 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 RELL2Q8NC24 303 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 VSTM2LQ96N03 204 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 FARSAQ9Y285 508 aaKnown RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 A0A0J9YY10 115 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 TCRBV21S2A2A0A5A6 115 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 HCRTR2O43614 444 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 EN2P19622 333 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 OR1D4P47884 311 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DYRK1AQ13627 763 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 TOMM34Q15785 309 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DPY19L2P2Q6ZN68 376 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 MNTQ99583 582 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ACTR6Q9GZN1 396 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF337Q9Y3M9 751 aa12.79□□□□□ -0.36
COL6A1-207ENST00000612273 LINC00862A6NCI5 91 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 M0QYG6 137 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 RBBP9O75884 186 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 GLCEO94923 617 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 VSIG10L2P0DP72 767 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 CD53P19397 219 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 LINC01590Q5TEZ4 76 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 OR4C16Q8NGL9 310 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 SLC2A12Q8TD20 617 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 PMEPA1Q969W9 287 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 LPAR4Q99677 370 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 ZNF426Q9BUY5 554 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 TMEM184BQ9Y519 407 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 C2orf72A6NCS6 295 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 PDCD5O14737 125 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 SPARCP09486 303 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 NFYAP23511 347 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 RAB38P57729 211 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 AP3S2P59780 193 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 RPL18Q07020 188 aaKnown RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 Q499Y3 187 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 SHISA6Q6ZSJ9 500 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 RBPMSQ93062 196 aaKnown RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 PIPOXQ9P0Z9 390 aa12.78□□□□□ -0.36
COL6A1-207ENST00000612273 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-207ENST00000612273 AK1P00568 194 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 CD3DP04234 171 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 H2BFSP57053 126 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 BIKQ13323 160 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 NKPD1Q17RQ9 610 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 SCGB2B2Q4G0G5 96 aa12.77□□□□□ -0.36
COL6A1-207ENST00000612273 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms