RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 DIMT1Q9UNQ2 313 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ERGIC3Q9Y282 383 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 FAM215AQ9Y5M1 114 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 METTL15A6NJ78 407 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CD8B2A6NJW9 211 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SHISA8B8ZZ34 492 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CCRL2O00421 344 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SULT1C4O75897 302 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 LYPD3O95274 346 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 NTN1O95631 604 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 AGAP20933 346 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TGFBR1P36897 503 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ADORA2A-AS1P86434 159 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PLAURQ03405 335 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SRYQ05066 204 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PMPCAQ10713 525 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 MED22Q15528 200 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TOMM34Q15785 309 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SSX1Q16384 188 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TIMM50Q3ZCQ8 353 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ACSF3Q4G176 576 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 NSUN5P2Q63ZY6 315 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 XKRXQ6PP77 449 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CHMP1BQ7LBR1 199 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 RRM2BQ7LG56 351 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 BCDIN3DQ7Z5W3 292 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ADGRE4PQ86SQ3 457 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF808Q8N4W9 903 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 KBTBD8Q8NFY9 601 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OR52I1Q8NGK6 324 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CHPT1Q8WUD6 406 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 RND1Q92730 232 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OSTF1Q92882 214 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 FAM46AQ96IP4 442 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 LRR1Q96L50 414 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OPALINQ96PE5 141 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PRSS27Q9BQR3 290 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 MND1Q9BWT6 205 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OR51E2Q9H255 320 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 MMP27Q9H306 513 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CALHM2Q9HA72 323 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 FGF20Q9NP95 211 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TBCCD1Q9NVR7 557 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ETAA1Q9NY74 926 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 IL20Q9NYY1 176 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CCDC59Q9P031 241 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CLEC2DQ9UHP7 191 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 IRGMA1A4Y4 181 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 TRAPPC13A5PLN9 417 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 GJE1A6NN92 205 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 KDM4EB2RXH2 506 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 PRODHO43272 600 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 ZG16O60844 167 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 GLI4P10075 376 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 BMP4P12644 408 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 GP1BBP13224 206 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 PRG2P13727 222 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 FKBP2P26885 142 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 HTR2AP28223 471 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 TIMP3P35625 211 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 APOBEC1P41238 236 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 HTR3AP46098 478 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SUCLG1P53597 346 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 COPZ1P61923 177 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 RAB40BQ12829 278 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SELENBP1Q13228 472 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SPHARQ15513 63 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SNAPC1Q16533 368 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 TSTQ16762 297 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF404Q494X3 552 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 KLHL22Q53GT1 634 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 PDSS1Q5T2R2 415 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 RIPPLY2Q5TAB7 128 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 GDPGP1Q6ZNW5 385 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 DCDC5Q6ZRR9 648 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 ESPNLQ6ZVH7 1005 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 MRGPRGQ86SM5 289 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 RANBP3LQ86VV4 465 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 MEX3DQ86XN8 651 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 NRMQ8IXM6 262 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 RNF113BQ8IZP6 322 aaKnown RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 RPRMLQ8N4K4 120 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM255BQ8WV15 326 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 ASB5Q8WWX0 329 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SMPDL3BQ92485 455 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SLC38A2Q96QD8 506 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 TRIB1Q96RU8 372 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 NPAS1Q99742 590 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 CENPOQ9BU64 300 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 PRRG3Q9BZD7 231 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SERINC1Q9NRX5 453 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 FAIMQ9NVQ4 179 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 PAQR5Q9NXK6 330 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-217ENST00000611848 COQ3Q9NZJ6 369 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 SLC7A7Q9UM01 511 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 CDH10Q9Y6N8 788 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 KIAA1549Q9HCM3 1950 aa7.91□□□□□ -1.14
SMAD4-217ENST00000611848 MBD3L4A6NDZ8 208 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms