RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ZNF69Q9UC07 566 aa14.59□□□□□ -0.07
RTN1-209ENST00000611068 TMEM184BQ9Y519 407 aaPredicted RBP14.59□□□□□ -0.07
RTN1-209ENST00000611068 H3BN98 237 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 CHST10O43529 356 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 PRKNO60260 465 aaPredicted RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 GIMD1P0DJR0 217 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 NT5EP21589 574 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 RBMS1P29558 406 aaKnown RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 PPP2R1BP30154 601 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 LIMS1P48059 325 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 FOXL2P58012 376 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 SPCS3P61009 180 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 SKP2Q13309 424 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 SNTB2Q13425 540 aaKnown RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 CDPF1Q6NVV7 123 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 MAML2Q8IZL2 1156 aaPredicted RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 CA13Q8N1Q1 262 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 LRRC25Q8N386 305 aaPredicted RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 SLC16A11Q8NCK7 471 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 TVP23BQ9NYZ1 205 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 TESQ9UGI8 421 aaKnown RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 NDOR1Q9UHB4 597 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 DSPPQ9NZW4 1301 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 ZNF44P15621 663 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 CELP19835 753 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 TAS2R60P59551 318 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 RAP2BP61225 183 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 RNF4P78317 190 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 BTG2P78543 158 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 FAM76BQ5HYJ3 339 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 SLC30A6Q6NXT4 461 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 ARRDC1Q8N5I2 433 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 MMABQ96EY8 250 aaPredicted RBP14.58□□□□□ -0.08
RTN1-209ENST00000611068 NUDT22Q9BRQ3 303 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 SEMA3GQ9NS98 782 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 GPR179Q6PRD1 2367 aa14.58□□□□□ -0.08
RTN1-209ENST00000611068 LOC390937A0A1W2PQ73 354 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CYR61O00622 381 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CHRM4P08173 479 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CNR1P21554 472 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 HOXA6P31267 233 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 TSFMP43897 325 aaKnown RBP14.57□□□□□ -0.08
RTN1-209ENST00000611068 FUT5Q11128 374 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 IFI44LQ53G44 452 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CASP12Q6UXS9 341 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 ALX4Q9H161 411 aaPredicted RBP14.57□□□□□ -0.08
RTN1-209ENST00000611068 TLNRD1Q9H1K6 362 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 RASL12Q9NYN1 266 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 ADAMTS9Q9P2N4 1935 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 IGHV1OR21-1A0A087WYE8 117 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 FRS3O43559 492 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 GP1BAP07359 652 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CT62P0C5K7 136 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 CPMP14384 443 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 OR1D4P47884 311 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 GAS1P54826 345 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 OR10A3P58181 314 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 GINS1Q14691 196 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 PRSS45Q7RTY3 260 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 LHFPL3Q86UP9 236 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 SLITRK4Q8IW52 837 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 PRSS58Q8IYP2 241 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 RCBTB1Q8NDN9 531 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 GPR32P1Q8NGA4 272 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 OR7D2Q96RA2 312 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 FUZQ9BT04 418 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 ZSCAN32Q9NX65 697 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 RASD1Q9Y272 281 aa14.57□□□□□ -0.08
RTN1-209ENST00000611068 FREM2Q5SZK8 3169 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 TRBV4-1A0A0J9YWV2 114 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 M0R3H8 397 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 HRKO00198 91 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ARPC1BO15143 372 aaKnown RBP14.56□□□□□ -0.08
RTN1-209ENST00000611068 OR2T1O43869 369 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 FCMRO60667 390 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 GNSP15586 552 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ZNF10P21506 573 aaPredicted RBP14.56□□□□□ -0.08
RTN1-209ENST00000611068 NOS3P29474 1203 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 THBS2P35442 1172 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ARRB1P49407 418 aaPredicted RBP14.56□□□□□ -0.08
RTN1-209ENST00000611068 ARL4DP49703 201 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 PCBP3P57721 371 aaKnown RBP14.56□□□□□ -0.08
RTN1-209ENST00000611068 HLA-BQ31612 363 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 C12orf73Q69YU5 71 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ZNF770Q6IQ21 691 aaPredicted RBP14.56□□□□□ -0.08
RTN1-209ENST00000611068 H3F3CQ6NXT2 135 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 OGFOD3Q6PK18 319 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ESPNLQ6ZVH7 1005 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 C1orf210Q8IVY1 113 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 SLC43A2Q8N370 569 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 OR4D11Q8NGI4 311 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 TCTN2Q96GX1 697 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 ARHGAP9Q9BRR9 750 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 COLCA2A8K830 154 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 TMEM150CB9EJG8 249 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 EMC8O43402 210 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 FOXS1O43638 330 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 OR2A4O95047 310 aa14.56□□□□□ -0.08
RTN1-209ENST00000611068 PTNP21246 168 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms