RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 ABHD12BQ7Z5M8 362 aaPredicted RBP11.14□□□□□ -0.63
CD9-212ENST00000610354 GPR137CQ8N3F9 429 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 TMEM54Q969K7 222 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 LRR1Q96L50 414 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 FNDC11Q9BVV2 318 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 ESRP2Q9H6T0 727 aaKnown RBP11.14□□□□□ -0.63
CD9-212ENST00000610354 CRLF2Q9HC73 371 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 RPS6KA6Q9UK32 745 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 AMDHD2Q9Y303 409 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 V9GYQ6 96 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 BLOC1S5-TXNDC5H3BN57 136 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 hCG_2039718K7EN88 272 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 M0R1B8 84 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ABCD4O14678 606 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 RNF13O43567 381 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 SEC14L2O76054 403 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 DIRAS1O95057 198 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 OR6A2O95222 327 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 F13BP05160 661 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 DANCRP0C864 163 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 IFI30P13284 250 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 CD40P25942 277 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 PRPS1P60891 318 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 MXRA7P84157 204 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 PRKCDQ05655 676 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
CD9-212ENST00000610354 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 B3GLCTQ6Y288 498 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 NANOGNBQ7Z5D8 188 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 NRMQ8IXM6 262 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 LRRC75AQ8NAA5 344 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 OR6X1Q8NH79 312 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 MAGEE2Q8TD90 523 aaPredicted RBP11.13□□□□□ -0.63
CD9-212ENST00000610354 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 PYURFQ96I23 114 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 DHRS1Q96LJ7 313 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 FUZQ9BT04 418 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
CD9-212ENST00000610354 MAGEL2Q9UJ55 1249 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ZNF469Q96JG9 3925 aaPredicted RBP11.13□□□□□ -0.63
CD9-212ENST00000610354 ACANP16112 2415 aa11.13□□□□□ -0.63
CD9-212ENST00000610354 ARPC4-TTLL3A0A0A6YYG9 625 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 ZNF726A6NNF4 738 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 E7EQL1 145 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 HIST1H2ABP04908 130 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 ZNF26P17031 533 aaPredicted RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 ATP6V1B2P21281 511 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 SEC23BQ15437 767 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 PGGHGQ32M88 737 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 LRFN4Q6PJG9 635 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 C20orf204Q6ZNR8 217 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 HIST3H2AQ7L7L0 130 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 SSX8Q7RTT4 187 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 SLC7A13Q8TCU3 470 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 ACOT11Q8WXI4 607 aaPredicted RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 HIST1H2ACQ93077 130 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 PIP5K1AQ99755 562 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 NDE1Q9NXR1 346 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 TAS2R1Q9NYW7 299 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 SAMD4AQ9UPU9 718 aaKnown RBP11.12□□□□□ -0.63
CD9-212ENST00000610354 HIF3AQ9Y2N7 669 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
CD9-212ENST00000610354 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 TCRBV5S2A0A599 114 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 CDC42EP2O14613 210 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 CD8AP01732 235 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 SOD3P08294 240 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 PGA4P0DJD7 388 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 PGA3P0DJD8 388 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 RHCEP18577 417 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 CALB2P22676 271 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 PTAFRP25105 342 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 CSNK1A1P48729 337 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 MNAT1P51948 309 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 SH3BGRP55822 239 aaPredicted RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 RPS4XP62701 263 aaKnown RBP11.11□□□□□ -0.63
CD9-212ENST00000610354 MS4A2Q01362 244 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 HIST3H3Q16695 136 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 SPATS1Q496A3 300 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ARMC4Q5T2S8 1044 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 TMEM108Q6UXF1 575 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
CD9-212ENST00000610354 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms